Genome: Nocardiopsis alba ATCC BAA-2165 (NC_018524.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 80135-80245 (+)TPP81460-81685 (+)thiS

Thiamine biosynthesis protein ThiS		B005_0076Operon

DOOR ID: 1144236		B005_0075 (thiO),
B005_0076 (thiS),
B005_0077 (thiG)		 View Structure
2 637842-637988 (+)cobalamin638021-641612 (+)cobN

Cobaltochelatase; CobN subunit 		B005_0623Operon

DOOR ID: 1144333		B005_0623 (cobN),
B005_0624 (cobF),
B005_0625 (cobQ),
B005_0626 (cobK)		 View Structure
3 652410-652522 (-)cobalamin650285-652361 (-)B005_0630

AAA domain family protein		B005_0630Operon

DOOR ID: 1144334		B005_0628 (cobB),
B005_0629 (cobO),
B005_0630		 View Structure
4 657698-657903 (-)cobalamin656773-657646 (-)B005_0636

Nitrite/Sulfite reductase ferredoxin-like half domain protein		B005_0636Operon

DOOR ID: 1144337		B005_0635 (cobH),
B005_0636		 View Structure
5 897049-897163 (-)TPP895288-896920 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		B005_0871Single gene

DOOR ID: 3897950		B005_0871 (thiC) View Structure
6 1336969-1337036 (-)ykkC-III1336622-1336937 (-)sugE

B005_1285single gene

DOOR ID: 3898146		B005_1285 (sugE) View Structure
7 1430408-1430546 (-)SAM1429134-1430394 (-)B005_1379

Threonine synthase 		B005_1379Operon

DOOR ID: 1144483		B005_1378,
B005_1379		 View Structure
8 2022884-2022990 (+)TPP2023046-2023835 (+)B005_1949

Short chain dehydrogenase family protein		B005_1949Operon

DOOR ID: 1144590		B005_1949,
B005_1950		 View Structure
9 2365676-2365876 (+)cobalamin2366112-2368560 (+)B005_2258

Vitamin B12-dependent ribonucleotide reductase 		B005_2258Operon

DOOR ID: 1144656		B005_2258,
B005_2259		 View Structure
10 3248273-3248380 (+)TPP3248457-3249099 (+)B005_3116

ABC-type cobalt transport system; permease component family protein		B005_3116Operon

DOOR ID: 1144829		B005_3116,
B005_3117,
B005_3118,
B005_3119		 View Structure
11 3432907-3433008 (-)glycine3431648-3432764 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		B005_3298Single gene

DOOR ID: 3899012		B005_3298 (gcvT) View Structure
12 3669610-3669710 (-)TPP3667336-3668755 (+)B005_3501

Amino acid carrier family protein		B005_3501Single gene

DOOR ID: 3899106		B005_3501 View Structure
13 3899462-3899679 (+)cobalamin3899744-3899861 (-)B005_3716

B005_3716Single gene

DOOR ID: 3899197		B005_3716 View Structure
14 3938171-3938285 (+)SAM-IV3938349-3939720 (+)B005_3755

Aminotransferase class-V family protein		B005_3755Single gene

DOOR ID: 3899217		B005_3755 View Structure
15 3948032-3948162 (+)FMN3948280-3948907 (+)ribE

Riboflavin synthase; alpha subunit 		B005_3763Operon

DOOR ID: 1144962		B005_3763 (ribE),
B005_3764 (ribA),
B005_3765 (ribH)		 View Structure
16 4146140-4146252 (+)SAM-IV4146331-4147984 (+)B005_3959

Bacterial extracellular solute-binding s; 5 Middle family protein		B005_3959Operon

DOOR ID: 1145005		B005_3959,
B005_3960,
B005_3961,
B005_3962,
B005_3963,
B005_3964,
B005_3965,
B005_3966		 View Structure
17 4297869-4297959 (+)glycine4298149-4300900 (+)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		B005_4083Single gene

DOOR ID: 3899359		B005_4083 (gcvP) View Structure
18 5345980-5346182 (+)cobalamin5346206-5347253 (+)B005_5155

Periplasmic binding family protein		B005_5155Operon

DOOR ID: 1145255		B005_5155,
B005_5156,
B005_5157		 View Structure