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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
160625-160795
(+)
ykoK
161093-162830 (+)
MYCMA_2592
MYCMA_2592
Single gene
DOOR ID:
3876780
MYCMA_2592
(mntH)
View Structure
2
281023-281237
(+)
cobalamin
281373-283644 (+)
MYCMA_2553
MYCMA_2553
Single gene
DOOR ID:
3876757
MYCMA_2553
(metE)
View Structure
3
689001-689106
(-)
TPP
686517-687354 (-)
MYCMA_2334
MYCMA_2334
Operon
DOOR ID:
1133883
MYCMA_2333
(thiC)
,
MYCMA_2334
(thiD)
View Structure
4
1201807-1201943
(-)
SAM-IV
1200273-1201635 (-)
MYCMA_2027
MYCMA_2027
Operon
DOOR ID:
1133819
MYCMA_2027
(mdeA)
,
MYCMA_2028
(metX)
,
MYCMA_2029
View Structure
5
2270226-2270268
(+)
mini-ykkC
2270290-2270605 (+)
MYCMA_1430
MYCMA_1430
Operon
DOOR ID:
1133700
MYCMA_1428
(tesB)
,
MYCMA_1429
(pyk)
,
MYCMA_1430
(sugE)
View Structure
6
2469117-2469189
(-)
fluoride
2468631-2469102 (-)
MYCMA_1328
MYCMA_1328
Single gene
DOOR ID:
3876165
MYCMA_1328
(crcB1)
View Structure
7
2505531-2505628
(-)
glycine
2502507-2505375 (-)
MYCMA_1306
MYCMA_1306
Single gene
DOOR ID:
3876156
MYCMA_1306
(gcvP)
View Structure
8
2799083-2799164
(-)
SAH
2795315-2799083 (-)
metH
MYCMA_1116
Single gene
DOOR ID:
3876068
MYCMA_1116
(metH)
View Structure
9
4153479-4153701
(+)
cobalamin
4153802-4154855 (+)
MYCMA_0277
MYCMA_0277
Operon
DOOR ID:
1133491
MYCMA_0276
(hmuV)
,
MYCMA_0277
(yvrB)
View Structure
10
4191321-4191433
(-)
SAM-IV
4189992-4191288 (-)
MYCMA_0252
MYCMA_0252
Single gene
DOOR ID:
3875651
MYCMA_0252
(sufS)
View Structure
Genome:
Mycobacterium massiliense str. GO 06
(
NC_018150.2
);
Phylum:
Actinobacteria
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