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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
79201-79291
(-)
glycine
77615-78893 (-)
RVBD_0070c
RVBD_0070c
Operon
DOOR ID:
1132050
RVBD_0069c,
RVBD_0070c
View Structure
2
309685-309858
(-)
cobalamin
307876-309547 (-)
RVBD_0256c
RVBD_0256c
Operon
DOOR ID:
1132092
RVBD_0254c,
RVBD_0255c,
RVBD_0256c
View Structure
3
501050-501160
(+)
TPP
502169-502376 (+)
RVBD_0416
RVBD_0416
Operon
DOOR ID:
1132125
RVBD_0415,
RVBD_0416,
RVBD_0417
View Structure
4
510219-510329
(-)
TPP
507760-508558 (-)
RVBD_0422c
RVBD_0422c
Operon
DOOR ID:
1132126
RVBD_0421c,
RVBD_0422c,
RVBD_0423c
View Structure
5
965548-965770
(-)
ydaO-yuaA
964314-965538 (-)
RVBD_0867c
RVBD_0867c
Single gene
DOOR ID:
3873366
RVBD_0867c
View Structure
6
1261484-1261702
(-)
cobalamin
1259071-1261351 (-)
RVBD_1133c
RVBD_1133c
Single gene
DOOR ID:
3873480
RVBD_1133c
View Structure
7
1735515-1735684
(+)
ykoK
1735981-1736218 (+)
RVBD_1535
RVBD_1535
Single gene
DOOR ID:
3873631
RVBD_1535
View Structure
8
2047602-2047776
(+)
ykoK
2048078-2048378 (+)
RVBD_1806
RVBD_1806
Operon
DOOR ID:
1132460
RVBD_1806,
RVBD_1807
View Structure
9
2075620-2075717
(+)
glycine
2075883-2078709 (+)
RVBD_1832
RVBD_1832
Operon
DOOR ID:
1132465
RVBD_1830,
RVBD_1831,
RVBD_1832
View Structure
10
3726142-3726261
(+)
SAM-IV
3726297-3727647 (+)
RVBD_3340
RVBD_3340
Operon
DOOR ID:
1132831
RVBD_3340,
RVBD_3341,
RVBD_3342
View Structure
Genome:
Mycobacterium tuberculosis H37Rv
(
NC_018143.2
);
Phylum:
Actinobacteria
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