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Genome:
Streptococcus intermedius JTH08
(
NC_018073.1
);
Phylum:
Firmicutes
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
244313-244415
(+)
purine
244538-245807 (+)
trzA
SCIM_0209
Single gene
DOOR ID:
3857568
View Structure
2
276608-276695
(-)
TPP
275963-276524 (-)
SCIM_0237
SCIM_0237
Operon
DOOR ID:
1123486
SCIM_0235,
SCIM_0236,
SCIM_0237
View Structure
3
497448-497600
(+)
ykoK
497860-500515 (+)
SCIM_0433
SCIM_0433
Single gene
DOOR ID:
3857640
SCIM_0433
View Structure
4
984864-984959
(+)
purine
985055-985637 (+)
SCIM_0854
SCIM_0854
Operon
DOOR ID:
1123631
SCIM_0854,
SCIM_0855
View Structure
5
1033147-1033256
(-)
preQ1-II
1031533-1032583 (+)
SCIM_0896
SCIM_0896
Operon
DOOR ID:
1123640
SCIM_0895,
SCIM_0896
View Structure
6
1377048-1377275
(-)
FMN
1376334-1376898 (-)
SCIM_1202
SCIM_1202
Operon
DOOR ID:
1123710
SCIM_1198,
SCIM_1199,
SCIM_1200,
SCIM_1201,
SCIM_1202
View Structure
7
1673007-1673096
(-)
THF
1672412-1672973 (-)
SCIM_1470
SCIM_1470
Operon
DOOR ID:
1123769
SCIM_1470,
SCIM_1471,
SCIM_1472
View Structure
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