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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
495264-495373
(+)
TPP
496402-496600 (+)
Mycch_0481
Thiamine biosynthesis protein ThiS
Mycch_0481
Operon
DOOR ID:
1295487
Mycch_0480,
Mycch_0481,
Mycch_0482,
Mycch_0483,
Mycch_0484,
Mycch_0485
View Structure
2
518922-519033
(-)
TPP
516524-517361 (-)
Mycch_0501
Phosphomethylpyrimidine kinase
Mycch_0501
Operon
DOOR ID:
1295491
Mycch_0496,
Mycch_0497,
Mycch_0498,
Mycch_0499,
Mycch_0500,
Mycch_0501,
Mycch_0502
View Structure
3
688266-688332
(+)
ykkC-III
688343-688658 (+)
Mycch_0688
Mycch_0688
operon
DOOR ID:
1295532
Mycch_0688,
Mycch_0689,
Mycch_0690,
Mycch_0691,
Mycch_0692,
Mycch_0693,
Mycch_0694,
Mycch_0695
View Structure
4
1163462-1163581
(-)
SAM-IV
1162055-1163420 (-)
Mycch_1159
O-acetylhomoserine sulfhydrylase (9)
Mycch_1159
Operon
DOOR ID:
1295631
Mycch_1157,
Mycch_1158,
Mycch_1159
View Structure
5
2851533-2851631
(+)
glycine
2851812-2854689 (+)
Mycch_2757
Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Mycch_2757
Operon
DOOR ID:
1295971
Mycch_2757,
Mycch_2758
View Structure
6
2992809-2992884
(-)
SAH
2990164-2992441 (-)
Mycch_2868
Anaerobic dehydrogenase; typically selenocysteine-containing
Mycch_2868
Operon
DOOR ID:
1295993
Mycch_2868,
Mycch_2869
View Structure
7
3265692-3265781
(-)
SAH
3261927-3265677 (-)
Mycch_3127
Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Mycch_3127
Single gene
DOOR ID:
3851479
Mycch_3127
View Structure
8
4637695-4637908
(+)
ydaO-yuaA
4637917-4639084 (+)
Mycch_4422
Transglycosylase-like protein
Mycch_4422
Single gene
DOOR ID:
3851868
Mycch_4422
View Structure
Genome:
Mycobacterium chubuense NBB4
(
NC_018027.1
);
Phylum:
Actinobacteria
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