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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
166488-166651
(+)
cobalamin
166758-168612 (+)
Anamo_0161
Outer membrane cobalamin receptor protein
Anamo_0161
Single gene
DOOR ID:
3847906
Anamo_0161
View Structure
2
184866-184975
(-)
TPP
184056-184800 (-)
Anamo_0178
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component
Anamo_0178
Operon
DOOR ID:
1119351
Anamo_0171,
Anamo_0172,
Anamo_0173,
Anamo_0174,
Anamo_0175,
Anamo_0176,
Anamo_0177,
Anamo_0178
View Structure
3
214087-214188
(+)
SAM
214272-215556 (+)
Anamo_0213
OAH/OAS sulfhydrylase
Anamo_0213
Operon
DOOR ID:
1119362
Anamo_0213,
Anamo_0214
View Structure
4
222141-222240
(+)
TPP
222351-223131 (+)
Anamo_0225
Thiamine thiazole synthase
Anamo_0225
Single gene
DOOR ID:
3847915
Anamo_0225
View Structure
5
227668-227767
(+)
TPP
227824-229099 (+)
Anamo_0232
Hydroxymethylpyrimidine synthase
Anamo_0232
Single gene
DOOR ID:
3847918
Anamo_0232
View Structure
6
380238-380334
(+)
glycine
380448-380853 (+)
Anamo_0395
Anamo_0395
Operon
DOOR ID:
1119390
Anamo_0395,
Anamo_0396,
Anamo_0397,
Anamo_0398,
Anamo_0399,
Anamo_0400
View Structure
7
943177-943302
(-)
MOCO
940183-942979 (-)
Anamo_0983
Aerobic-type carbon monoxide dehydrogenase; large subunit CoxL/CutL-like protein
Anamo_0983
Operon
DOOR ID:
1119475
Anamo_0982,
Anamo_0983
View Structure
8
1010431-1010591
(-)
glmS
1008573-1010400 (-)
Anamo_1042
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Anamo_1042
Single gene
DOOR ID:
3848004
Anamo_1042
View Structure
9
1027083-1027201
(-)
MOCO
1024004-1026734 (-)
Anamo_1057
Aerobic-type carbon monoxide dehydrogenase; large subunit CoxL/CutL-like protein
Anamo_1057
Single gene
DOOR ID:
3848005
Anamo_1057
View Structure
10
1573985-1574108
(-)
MOCO
1572115-1573963 (-)
Anamo_1576
Aldehyde:ferredoxin oxidoreductase
Anamo_1576
Single gene
DOOR ID:
3848145
Anamo_1576
View Structure
11
1671870-1671989
(-)
MOCO
1670941-1671793 (-)
Anamo_1660
ABC-type tungstate transport system; permease component
Anamo_1660
Single gene
DOOR ID:
3848172
Anamo_1660
View Structure
12
2062878-2062967
(-)
c-di-GMP-II
2060970-2062665 (-)
Anamo_2012
Type II secretory pathway; ATPase PulE/Tfp pilus assembly pathway; ATPase PilB
Anamo_2012
Operon
DOOR ID:
1119679
Anamo_1999,
Anamo_2000,
Anamo_2001,
Anamo_2002,
Anamo_2003,
Anamo_2004,
Anamo_2005,
Anamo_2006,
Anamo_2007,
Anamo_2008,
Anamo_2009,
Anamo_2010,
Anamo_2011,
Anamo_2012
View Structure
Genome:
Anaerobaculum mobile DSM 13181
(
NC_018024.1
);
Phylum:
Synergistia
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ATPase component";i:13;s:10:"Anamo_0178";i:14;s:6:"Operon";i:15;s:7:"1119351";i:16;s:87:"Anamo_0171;Anamo_0172;Anamo_0173;Anamo_0174;Anamo_0175;Anamo_0176;Anamo_0177;Anamo_0178";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:13:"214087-214188";i:6;s:1:"+";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:13:"214272-215556";i:10;s:1:"+";i:11;s:10:"Anamo_0213";i:12;s:21:"OAH/OAS sulfhydrylase";i:13;s:10:"Anamo_0213";i:14;s:6:"Operon";i:15;s:7:"1119362";i:16;s:21:"Anamo_0213;Anamo_0214";i:17;s:50:"cellular amino acid metabolic process [GO:0006520]";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:13:"222141-222240";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"222351-223131";i:10;s:1:"+";i:11;s:10:"Anamo_0225";i:12;s:27:"Thiamine thiazole synthase ";i:13;s:10:"Anamo_0225";i:14;s:11:"Single gene";i:15;s:7:"3847915";i:16;s:10:"Anamo_0225";i:17;s:142:"thiamine biosynthetic process [GO:0009228]; thiamine diphosphate biosynthetic process [GO:0009229]; thiazole biosynthetic process [GO:0052837]";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:13:"227668-227767";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"227824-229099";i:10;s:1:"+";i:11;s:10:"Anamo_0232";i:12;s:32:"Hydroxymethylpyrimidine synthase";i:13;s:10:"Anamo_0232";i:14;s:11:"Single gene";i:15;s:7:"3847918";i:16;s:10:"Anamo_0232";i:17;s:42:"thiamine biosynthetic process [GO:0009228]";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:13:"380238-380334";i:6;s:1:"+";i:7;s:7:"glycine";i:8;s:0:"";i:9;s:13:"380448-380853";i:10;s:1:"+";i:11;s:10:"Anamo_0395";i:12;s:0:"";i:13;s:10:"Anamo_0395";i:14;s:6:"Operon";i:15;s:7:"1119390";i:16;s:65:"Anamo_0395;Anamo_0396;Anamo_0397;Anamo_0398;Anamo_0399;Anamo_0400";i:17;s:0:"";i:18;s:15:"View Structure ";}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:13:"943177-943302";i:6;s:1:"-";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:13:"940183-942979";i:10;s:1:"-";i:11;s:10:"Anamo_0983";i:12;s:80:"Aerobic-type carbon monoxide dehydrogenase; large subunit CoxL/CutL-like protein";i:13;s:10:"Anamo_0983";i:14;s:6:"Operon";i:15;s:7:"1119475";i:16;s:21:"Anamo_0982;Anamo_0983";i:17;s:0:"";i:18;s:15:"View Structure ";}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:15:"1010431-1010591";i:6;s:1:"-";i:7;s:4:"glmS";i:8;s:0:"";i:9;s:15:"1008573-1010400";i:10;s:1:"-";i:11;s:10:"Anamo_1042";i:12;s:240:"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)";i:13;s:10:"Anamo_1042";i:14;s:11:"Single gene";i:15;s:7:"3848004";i:16;s:10:"Anamo_1042";i:17;s:102:"carbohydrate derivative biosynthetic process [GO:1901137]; carbohydrate metabolic process [GO:0005975]";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:15:"1027083-1027201";i:6;s:1:"-";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:15:"1024004-1026734";i:10;s:1:"-";i:11;s:10:"Anamo_1057";i:12;s:80:"Aerobic-type carbon monoxide dehydrogenase; large subunit CoxL/CutL-like protein";i:13;s:10:"Anamo_1057";i:14;s:11:"Single gene";i:15;s:7:"3848005";i:16;s:10:"Anamo_1057";i:17;s:0:"";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:15:"1573985-1574108";i:6;s:1:"-";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:15:"1572115-1573963";i:10;s:1:"-";i:11;s:10:"Anamo_1576";i:12;s:34:"Aldehyde:ferredoxin oxidoreductase";i:13;s:10:"Anamo_1576";i:14;s:11:"Single gene";i:15;s:7:"3848145";i:16;s:10:"Anamo_1576";i:17;s:0:"";i:18;s:15:"View Structure ";}i:11;a:19:{i:0;i:11;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:15:"1671870-1671989";i:6;s:1:"-";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:15:"1670941-1671793";i:10;s:1:"-";i:11;s:10:"Anamo_1660";i:12;s:55:"ABC-type tungstate transport system; permease component";i:13;s:10:"Anamo_1660";i:14;s:11:"Single gene";i:15;s:7:"3848172";i:16;s:10:"Anamo_1660";i:17;s:0:"";i:18;s:15:"View Structure ";}i:12;a:19:{i:0;i:12;i:1;s:11:"NC_018024.1";i:2;s:31:"Anaerobaculum mobile DSM 13181 ";i:3;s:11:"Synergistia";i:4;s:6:"649775";i:5;s:15:"2062878-2062967";i:6;s:1:"-";i:7;s:11:"c-di-GMP-II";i:8;s:0:"";i:9;s:15:"2060970-2062665";i:10;s:1:"-";i:11;s:10:"Anamo_2012";i:12;s:78:"Type II secretory pathway; ATPase PulE/Tfp pilus assembly pathway; ATPase PilB";i:13;s:10:"Anamo_2012";i:14;s:6:"Operon";i:15;s:7:"1119679";i:16;s:153:"Anamo_1999;Anamo_2000;Anamo_2001;Anamo_2002;Anamo_2003;Anamo_2004;Anamo_2005;Anamo_2006;Anamo_2007;Anamo_2008;Anamo_2009;Anamo_2010;Anamo_2011;Anamo_2012";i:17;s:0:"";i:18;s:15:"View Structure ";}}