About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1270075-1270145
(+)
fluoride
1270155-1271466 (+)
Terro_1123
Chloride channel protein EriC
Terro_1123
Single gene
DOOR ID:
3838785
Terro_1123
View Structure
2
1576731-1576832
(+)
SAM
1576982-1578281 (+)
Terro_1339
Threonine synthase
Terro_1339
Operon
DOOR ID:
1114785
Terro_1339,
Terro_1340
View Structure
3
2743438-2743606
(-)
cobalamin
2740943-2743385 (-)
Terro_2304
Outer membrane cobalamin receptor protein
Terro_2304
Single gene
DOOR ID:
3839216
Terro_2304
View Structure
4
3203953-3204121
(-)
cobalamin
3201458-3203900 (-)
Terro_2668
Outer membrane cobalamin receptor protein
Terro_2668
Single gene
DOOR ID:
3839364
Terro_2668
View Structure
5
4594392-4594594
(+)
cobalamin
4594737-4597020 (+)
Terro_3866
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Terro_3866
Single gene
DOOR ID:
3839895
Terro_3866
View Structure
Genome:
Terriglobus roseus DSM 18391
(
NC_018014.1
);
Phylum:
Acidobacteriia
a:6:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_018014.1";i:2;s:29:"Terriglobus roseus DSM 18391 ";i:3;s:14:"Acidobacteriia";i:4;s:6:"204432";i:5;s:15:"1270075-1270145";i:6;s:1:"+";i:7;s:8:"fluoride";i:8;s:0:"";i:9;s:15:"1270155-1271466";i:10;s:1:"+";i:11;s:10:"Terro_1123";i:12;s:29:"Chloride channel protein EriC";i:13;s:10:"Terro_1123";i:14;s:11:"Single gene";i:15;s:7:"3838785";i:16;s:10:"Terro_1123";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_018014.1";i:2;s:29:"Terriglobus roseus DSM 18391 ";i:3;s:14:"Acidobacteriia";i:4;s:6:"204432";i:5;s:15:"1576731-1576832";i:6;s:1:"+";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:15:"1576982-1578281";i:10;s:1:"+";i:11;s:10:"Terro_1339";i:12;s:18:"Threonine synthase";i:13;s:10:"Terro_1339";i:14;s:6:"Operon";i:15;s:7:"1114785";i:16;s:21:"Terro_1339;Terro_1340";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_018014.1";i:2;s:29:"Terriglobus roseus DSM 18391 ";i:3;s:14:"Acidobacteriia";i:4;s:6:"204432";i:5;s:15:"2743438-2743606";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2740943-2743385";i:10;s:1:"-";i:11;s:10:"Terro_2304";i:12;s:41:"Outer membrane cobalamin receptor protein";i:13;s:10:"Terro_2304";i:14;s:11:"Single gene";i:15;s:7:"3839216";i:16;s:10:"Terro_2304";i:17;s:34:"siderophore transport [GO:0015891]";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_018014.1";i:2;s:29:"Terriglobus roseus DSM 18391 ";i:3;s:14:"Acidobacteriia";i:4;s:6:"204432";i:5;s:15:"3203953-3204121";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"3201458-3203900";i:10;s:1:"-";i:11;s:10:"Terro_2668";i:12;s:41:"Outer membrane cobalamin receptor protein";i:13;s:10:"Terro_2668";i:14;s:11:"Single gene";i:15;s:7:"3839364";i:16;s:10:"Terro_2668";i:17;s:34:"siderophore transport [GO:0015891]";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_018014.1";i:2;s:29:"Terriglobus roseus DSM 18391 ";i:3;s:14:"Acidobacteriia";i:4;s:6:"204432";i:5;s:15:"4594392-4594594";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"4594737-4597020";i:10;s:1:"+";i:11;s:10:"Terro_3866";i:12;s:172:"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)";i:13;s:10:"Terro_3866";i:14;s:11:"Single gene";i:15;s:7:"3839895";i:16;s:10:"Terro_3866";i:17;s:44:"methionine biosynthetic process [GO:0009086]";i:18;s:15:"View Structure ";}}