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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1498603-1498710
(+)
TPP
1498809-1501002 (+)
Aeqsu_1400
Outer membrane receptor protein
Aeqsu_1400
Single gene
DOOR ID:
3837515
Aeqsu_1400
View Structure
2
1978323-1978442
(+)
SAM
1978555-1979851 (+)
Aeqsu_1834
O-acetylhomoserine sulfhydrylase (9)
Aeqsu_1834
Operon
DOOR ID:
1295106
Aeqsu_1836,
Aeqsu_1835,
Aeqsu_1834
View Structure
3
1982731-1982841
(+)
SAM
1983008-1984022 (+)
Aeqsu_1838
Cobalamin-dependent methionine synthase I
Aeqsu_1838
Operon
DOOR ID:
1295107
Aeqsu_1845,
Aeqsu_1844,
Aeqsu_1843,
Aeqsu_1842,
Aeqsu_1841,
Aeqsu_1840,
Aeqsu_1839,
Aeqsu_1838
View Structure
4
2292692-2292749
(+)
glutamine
2293558-2294305 (-)
Aeqsu_2122
Aeqsu_2122
Single gene
DOOR ID:
3837778
Aeqsu_2122
View Structure
5
3251485-3251685
(-)
cobalamin
3249622-3251455 (-)
Aeqsu_3001
Outer membrane cobalamin receptor protein
Aeqsu_3001
Operon
DOOR ID:
1295331
Aeqsu_3000,
Aeqsu_3001
View Structure
Genome:
Aequorivita sublithincola DSM 14238
(
NC_018013.1
);
Phylum:
Bacteroidetes/Chlorobi group
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