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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
323430-323529
(-)
TPP
322833-323382 (-)
LLNZ_01755
LLNZ_01755
Single gene
DOOR ID:
3817046
LLNZ_01755
View Structure
2
843952-844127
(+)
lysine
844227-845121 (+)
LLNZ_04500
LLNZ_04500
Operon
DOOR ID:
1103993
LLNZ_04480,
LLNZ_04485,
LLNZ_04490,
LLNZ_04495,
LLNZ_04500
View Structure
3
1165246-1165382
(+)
FMN
1165496-1166117 (+)
LLNZ_06150
Riboflavin transporter RibU (Riboflavin ECF transporter S component RibU)
LLNZ_06150
Single gene
DOOR ID:
3817415
LLNZ_06150
View Structure
4
1184930-1185030
(+)
TPP
1185111-1185864 (+)
LLNZ_06265
LLNZ_06265
Operon
DOOR ID:
1104062
LLNZ_06265,
LLNZ_06270,
LLNZ_06275
View Structure
5
1192001-1192161
(+)
ykoK
1192412-1195145 (+)
LLNZ_06300
LLNZ_06300
Single gene
DOOR ID:
3817417
LLNZ_06300
View Structure
6
1321799-1321896
(-)
purine
1321094-1321688 (-)
LLNZ_06960
LLNZ_06960
Operon
DOOR ID:
1104092
LLNZ_06955,
LLNZ_06960
View Structure
7
1451072-1451146
(-)
fluoride
1449575-1450787 (-)
LLNZ_07595
LLNZ_07595
Single gene
DOOR ID:
3817488
LLNZ_07595
View Structure
8
1505480-1505596
(-)
FMN
1504212-1505301 (-)
LLNZ_07880
LLNZ_07880
Operon
DOOR ID:
1104130
LLNZ_07865
(ribH)
,
LLNZ_07870,
LLNZ_07875,
LLNZ_07880
View Structure
9
1746947-1747052
(-)
preQ1-II
1745703-1746336 (-)
LLNZ_09085
LLNZ_09085
Single gene
DOOR ID:
3817613
LLNZ_09085
View Structure
10
2434195-2434376
(+)
lysine
2434533-2436000 (+)
LLNZ_12800
LLNZ_12800
Single gene
DOOR ID:
3817916
LLNZ_12800
View Structure
Genome:
Lactococcus lactis subsp. cremoris NZ9000
(
NC_017949.1
);
Phylum:
Firmicutes
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