About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
68815-68936
(-)
ykkC-yxkD
67652-68675 (-)
MYA_5122
Urea carboxylase-related ABC transporter
MYA_5122
Single gene
DOOR ID:
3808943
MYA_5122
View Structure
2
69423-69558
(+)
ykkC-yxkD
69615-70371 (+)
MYA_5124
Urea carboxylase-related aminomethyltransferase
MYA_5124
Operon
DOOR ID:
1100015
MYA_5124,
MYA_5125
View Structure
Genome:
Burkholderia sp. KJ006 chromosome II
(
NC_017922.1
);
Phylum:
Betaproteobacteria
a:3:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_017922.1";i:2;s:36:"Burkholderia sp. KJ006 chromosome II";i:3;s:18:"Betaproteobacteria";i:4;s:5:"28216";i:5;s:11:"68815-68936";i:6;s:1:"-";i:7;s:9:"ykkC-yxkD";i:8;s:0:"";i:9;s:11:"67652-68675";i:10;s:1:"-";i:11;s:8:"MYA_5122";i:12;s:40:"Urea carboxylase-related ABC transporter";i:13;s:8:"MYA_5122";i:14;s:11:"Single gene";i:15;s:7:"3808943";i:16;s:8:"MYA_5122";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_017922.1";i:2;s:36:"Burkholderia sp. KJ006 chromosome II";i:3;s:18:"Betaproteobacteria";i:4;s:5:"28216";i:5;s:11:"69423-69558";i:6;s:1:"+";i:7;s:9:"ykkC-yxkD";i:8;s:0:"";i:9;s:11:"69615-70371";i:10;s:1:"+";i:11;s:8:"MYA_5124";i:12;s:47:"Urea carboxylase-related aminomethyltransferase";i:13;s:8:"MYA_5124";i:14;s:6:"Operon";i:15;s:7:"1100015";i:16;s:17:"MYA_5124;MYA_5125";i:17;s:0:"";i:18;s:15:"View Structure ";}}