Genome: Actinoplanes sp. SE50/110 (NC_017803.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 521454-521587 (-)ydaO-yuaA520412-521450 (-)ACPL_562

ACPL_562Single gene

DOOR ID: 3784926		ACPL_562 View Structure
2 521796-521941 (+)ydaO-yuaA523041-523812 (-)tagH

ABC transporter ATP-binding protein (0)		ACPL_564Operon

DOOR ID: 1288513		ACPL_564 (tagH),
ACPL_565 (rfbA)		 View Structure
3 574799-574889 (+)ZMP-ZTP574909-576340 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		ACPL_609Single gene

DOOR ID: 3784944		ACPL_609 (glyA) View Structure
4 592937-593017 (-)SAH591456-592917 (-)sahH

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		ACPL_623Operon

DOOR ID: 1288526		ACPL_623 (sahH),
ACPL_624		 View Structure
5 617538-617746 (+)cobalamin617881-620350 (+)nrdL

Ribonucleoside-diphosphate reductase 		ACPL_649Operon

DOOR ID: 1288531		ACPL_649 (nrdL),
ACPL_650 (nrdM)		 View Structure
6 670905-671107 (-)ydaO-yuaA670153-670903 (-)ACPL_683

Secreted protein		ACPL_683Single gene

DOOR ID: 3784977		ACPL_683 View Structure
7 796754-796864 (+)TPP797438-798455 (+)thiO

Glycine oxidase (9)		ACPL_818Operon

DOOR ID: 1288569		ACPL_817 (thiE),
ACPL_818 (thiO),
ACPL_819,
ACPL_820 (thiG),
ACPL_821 (thiE),
ACPL_822 (thiD),
ACPL_823 (thiC)		 View Structure
8 805905-805979 (-)c-di-GMP-I805431-805884 (-)ACPL_825

Uncharacterized protein		ACPL_825operon

DOOR ID: 1288570		ACPL_824 (zan),
ACPL_825		 View Structure
9 1321815-1321942 (-)ydaO-yuaA1320818-1321766 (-)ACPL_1269

D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwlS (1)		ACPL_1269Single gene

DOOR ID: 3785182		ACPL_1269 View Structure
10 1492716-1492819 (-)TPP1492070-1492655 (-)ACPL_1429

Putative HMP/thiamine permease protein ykoE		ACPL_1429Operon

DOOR ID: 1288696		ACPL_1427,
ACPL_1428,
ACPL_1429		 View Structure
11 1861380-1861561 (+)ydaO-yuaA1861600-1862398 (+)ACPL_1752

Endopeptidase ykfC 		ACPL_1752Single gene

DOOR ID: 3785365		ACPL_1752 View Structure
12 2070025-2070099 (+)SAH2070116-2073716 (+)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		ACPL_1947Operon

DOOR ID: 1288810		ACPL_1947 (metH),
ACPL_1948		 View Structure
13 2460764-2460881 (+)SAM-IV2460893-2462120 (+)ACPL_2281

Cysteine desulfurase 		ACPL_2281Single gene

DOOR ID: 3785565		ACPL_2281 View Structure
14 3291606-3291737 (-)ydaO-yuaA3290613-3291567 (-)ACPL_3029

YibP-like uncharacterized protein		ACPL_3029Single gene

DOOR ID: 3785881		ACPL_3029 View Structure
15 4666220-4666288 (-)cobalamin4665957-4666161 (-)ACPL_4235

Putative membrane protein		ACPL_4235Operon

DOOR ID: 1289291		ACPL_4234,
ACPL_4235		 View Structure
16 4763835-4763903 (+)ykkC-III4763921-4764236 (+)sugE

ACPL_4345single gene

DOOR ID: 3786390		ACPL_4345 (sugE) View Structure
17 4829524-4829610 (-)glycine4826634-4829481 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		ACPL_4412Single gene

DOOR ID: 3786420		ACPL_4412 (gcvP) View Structure
18 4926324-4926421 (-)glycine4925152-4926202 (-)gcvT

Aminomethyltransferase (0)		ACPL_4517Operon

DOOR ID: 1289350		ACPL_4516 (sdaA),
ACPL_4517 (gcvT)		 View Structure
19 5147148-5147351 (-)cobalamin5146466-5147117 (-)ACPL_4734

5;6-dimethylbenzimidazole biosynthesis protein BluB 		ACPL_4734Single gene

DOOR ID: 3786568		ACPL_4734 View Structure
20 5621639-5621723 (+)c-di-GMP-II5621746-5622859 (+)capD

Polysaccharide biosynthesis protein CapD (6)		ACPL_5153Operon

DOOR ID: 1289483		ACPL_5153 (capD),
ACPL_5154		 View Structure
21 5787373-5787581 (-)cobalamin5785209-5787315 (-)chlI

Magnesium chelatase subunit D 		ACPL_5304Single gene

DOOR ID: 3786814		ACPL_5304 (chlI) View Structure
22 6034496-6034572 (+)SAH6034624-6035656 (+)add2

Adenosine deaminase 		ACPL_5523Single gene

DOOR ID: 3786896		ACPL_5523 (add2) View Structure
23 6891523-6891699 (+)ydaO-yuaA6891705-6892296 (+)ACPL_6254

NlpC-like probable lipoprotein		ACPL_6254Single gene

DOOR ID: 3787157		ACPL_6254 View Structure
24 7094297-7094474 (-)FMN7092840-7093896 (-)ribG

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		ACPL_6456Operon

DOOR ID: 1289738		ACPL_6453 (ribH),
ACPL_6454 (ribA),
ACPL_6455 (ribC),
ACPL_6456 (ribG)		 View Structure
25 7565444-7565523 (-)c-di-GMP-I7562089-7565428 (-)ACPL_6866

G-protein coupled receptor 98		ACPL_6866single gene

DOOR ID: 3787400		ACPL_6866 View Structure
26 7598383-7598523 (-)cobalamin7594812-7598352 (-)cobN

Cobaltochelatase CobN 		ACPL_6898Single gene

DOOR ID: 3787416		ACPL_6898 (cobN) View Structure
27 7843943-7844025 (+)ZMP-ZTP7844043-7844916 (+)folD

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]		ACPL_7100Single gene

DOOR ID: 3787485		ACPL_7100 (folD) View Structure
28 8794652-8794770 (-)SAM8793357-8794641 (-)ACPL_7989

Threonine synthase 		ACPL_7989Single gene

DOOR ID: 3787810		ACPL_7989 View Structure
29 8865016-8865106 (+)c-di-GMP-II8865129-8866206 (+)hgpB

Hemoglobin and hemoglobin-haptoglobin-binding protein B		ACPL_8047Single gene

DOOR ID: 3787837		ACPL_8047 (hgpB) View Structure