Genome: Halobacillus halophilus DSM 2266 (NC_017668.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 28105-28151 (-)PreQ127487-27982 (-)HBHAL_1027

NADPH-dependent 7-cyano-7-deazaguanine reductase (3) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)		HBHAL_1027Operon

DOOR ID: 1283858		HBHAL_1027,
HBHAL_1026		 View Structure
2 183055-183221 (+)glmS183332-185135 (+)HBHAL_1183

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		HBHAL_1183Single gene

DOOR ID: 3755686		HBHAL_1183 View Structure
3 325960-326135 (-)cobalamin323578-325813 (-)nrdA

Ribonucleoside-diphosphate reductase 		HBHAL_1321Operon

DOOR ID: 1283915		HBHAL_1321 (nrdA),
HBHAL_1320 (nrdB)		 View Structure
4 535593-535700 (-)SAM535312-535471 (-)HBHAL_1522

HBHAL_1522Single gene

DOOR ID: 3755851		HBHAL_1522 View Structure
5 596128-596229 (+)purine596347-597886 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		HBHAL_1583Single gene

DOOR ID: 3755872		HBHAL_1583 (guaA) View Structure
6 597970-598072 (+)purine598219-599554 (+)HBHAL_1584

Putative MFS-type transporter (Probable substrate xanthine/uracil)		HBHAL_1584Single gene

DOOR ID: 3755873		HBHAL_1584 View Structure
7 601610-601710 (+)purine601804-602296 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		HBHAL_1588Operon

DOOR ID: 1283963		HBHAL_1599 (purD),
HBHAL_1598 (purH),
HBHAL_1597 (purN),
HBHAL_1596 (purM),
HBHAL_1595 (purF),
HBHAL_1594 (purL),
HBHAL_1593 (purQ),
HBHAL_1592 (purS),
HBHAL_1591 (purC),
HBHAL_1590 (purB),
HBHAL_1589 (purK),
HBHAL_1588 (purE)		 View Structure
8 706974-707078 (-)SAM705782-706892 (-)metI

Cystathionine gamma-synthase (8)		HBHAL_1693Operon

DOOR ID: 1283982		HBHAL_1693 (metI),
HBHAL_1692 (metC1),
HBHAL_1691		 View Structure
9 764451-764562 (-)TPP764329-764425 (+)HBHAL_1755

HBHAL_1755Single gene

DOOR ID: 3755936		HBHAL_1755 View Structure
10 788837-788956 (+)SAM789075-789549 (+)HBHAL_1779

Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (1) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase)		HBHAL_1779Single gene

DOOR ID: 3755948		HBHAL_1779 View Structure
11 1018338-1018382 (-)PreQ11017584-1018253 (-)queC

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		HBHAL_2010Operon

DOOR ID: 1284038		HBHAL_2010 (queC),
HBHAL_2009 (ygcM),
HBHAL_2008 (queE)		 View Structure
12 1568621-1568726 (-)SAM1568062-1568545 (-)osmC2

OsmC family protein		HBHAL_2561Operon

DOOR ID: 1284132		HBHAL_2561 (osmC2),
HBHAL_2560		 View Structure
13 1679252-1679356 (-)SAM1677678-1678575 (-)ytnM

Probable membrane transporter protein		HBHAL_2673Single gene

DOOR ID: 3756384		HBHAL_2673 (ytnM) View Structure
14 1679522-1679622 (+)SAM1679723-1680455 (+)HBHAL_2675

Phosphoadenosine phosphosulfate reductase (3'-phosphoadenylylsulfate reductase) (PAPS reductase; thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)		HBHAL_2675Operon

DOOR ID: 1284151		HBHAL_2683,
HBHAL_2682,
HBHAL_2681,
HBHAL_2680 (sirC),
HBHAL_2679 (sirB),
HBHAL_2678 (cobA),
HBHAL_2677 (cysC1),
HBHAL_2676 (sat1),
HBHAL_2675,
HBHAL_2674		 View Structure
15 1706287-1706385 (+)TPP1706467-1707034 (+)HBHAL_2704

HBHAL_2704Single gene

DOOR ID: 3756395		HBHAL_2704 View Structure
16 2219722-2219766 (+)PreQ12219772-2220453 (+)ypdP

Probable queuosine precursor transporter (Q precursor transporter)		HBHAL_3228Operon

DOOR ID: 1284256		HBHAL_3228 (ypdP),
HBHAL_3229 (rnhA)		 View Structure
17 2306443-2306623 (-)cobalamin2305857-2306259 (-)HBHAL_3327

HBHAL_3327Operon

DOOR ID: 1284277		HBHAL_3326,
HBHAL_3327		 View Structure
18 2364331-2364433 (-)SAM2363121-2364165 (-)metN2

Methionine import ATP-binding protein MetN 		HBHAL_3388Operon

DOOR ID: 1284289		HBHAL_3386 (metQ2),
HBHAL_3387 (metP2),
HBHAL_3388 (metN2)		 View Structure
19 2391514-2391611 (-)TPP2390816-2391440 (-)HBHAL_3422

TenI family protein		HBHAL_3422Operon

DOOR ID: 1284294		HBHAL_3418 (thiF),
HBHAL_3419 (thiG),
HBHAL_3420 (thiS),
HBHAL_3421,
HBHAL_3422		 View Structure
20 2468939-2469025 (-)glycine2467669-2468770 (-)HBHAL_3503

Aminomethyltransferase (0) (Glycine cleavage system T protein)		HBHAL_3503Operon

DOOR ID: 1284309		HBHAL_3501,
HBHAL_3502,
HBHAL_3503		 View Structure
21 2818820-2818932 (-)SAM2817397-2818594 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		HBHAL_3853Single gene

DOOR ID: 3756815		HBHAL_3853 (metK) View Structure
22 2833514-2833662 (-)FMN2832747-2833347 (-)ypaA

Riboflavin transporter		HBHAL_3869Single gene

DOOR ID: 3756822		HBHAL_3869 (ypaA) View Structure
23 2877885-2878074 (-)lysine2876196-2877750 (-)HBHAL_3923

HBHAL_3923Single gene

DOOR ID: 3756853		HBHAL_3923 View Structure
24 2890304-2890413 (-)SAM2889205-2890231 (-)metN1

Methionine import ATP-binding protein MetN 		HBHAL_3936Operon

DOOR ID: 1284401		HBHAL_3934 (metQ1),
HBHAL_3935 (metP1),
HBHAL_3936 (metN1)		 View Structure
25 2890571-2890679 (-)SAM2889205-2890231 (-)metN1

Methionine import ATP-binding protein MetN 		HBHAL_3936Operon

DOOR ID: 1284401		HBHAL_3934 (metQ1),
HBHAL_3935 (metP1),
HBHAL_3936 (metN1)		 View Structure
26 3293699-3293807 (-)SAM3293437-3293578 (-)HBHAL_4356

HBHAL_4356Operon

DOOR ID: 1284491		HBHAL_4355,
HBHAL_4356		 View Structure
27 3619679-3619828 (-)FMN3618430-3619546 (-)HBHAL_4681

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		HBHAL_4681Operon

DOOR ID: 1284560		HBHAL_4678 (ribH),
HBHAL_4679 (ribA),
HBHAL_4680 (ribE),
HBHAL_4681		 View Structure
28 3744483-3744592 (+)SAM3744682-3746386 (+)HBHAL_4801

O-acetylhomoserine sulfhydrylase (9)		HBHAL_4801Operon

DOOR ID: 1284588		HBHAL_4801,
HBHAL_4802 (metX)		 View Structure
29 3875478-3875585 (-)TPP3874740-3875430 (-)tenA

Aminopyrimidine aminohydrolase 		HBHAL_4925Operon

DOOR ID: 1284610		HBHAL_4922 (thiE),
HBHAL_4923 (thiM),
HBHAL_4924 (thiD),
HBHAL_4925 (tenA)		 View Structure
30 3876159-3876268 (-)TPP3875590-3876079 (-)thiW

ThiW family protein		HBHAL_4926Single gene

DOOR ID: 3757239		HBHAL_4926 (thiW) View Structure
31 3894291-3894405 (-)SAM3893105-3894134 (-)metN3

Methionine import ATP-binding protein MetN 		HBHAL_4943Operon

DOOR ID: 1284614		HBHAL_4941 (metQ3),
HBHAL_4942 (metP3),
HBHAL_4943 (metN3)		 View Structure
32 3977774-3977952 (+)lysine3978071-3978965 (+)dapA3

4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) 		HBHAL_5017Single gene

DOOR ID: 3757275		HBHAL_5017 (dapA3) View Structure
33 4085472-4085575 (-)purine4084414-4085284 (-)mtnN3

Putative MTA/SAH nucleosidase (Homolog to 5'-methylthioadenosine/S-adenosylhomocysteinenucleosidase)		HBHAL_5109Single gene

DOOR ID: 3757314		HBHAL_5109 (mtnN3) View Structure