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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
77186-77285
(-)
TPP
76171-77155 (-)
tbpA
WFL_00330
Operon
DOOR ID:
1080881
WFL_00320
(thiQ)
,
WFL_00325
(thiP)
,
WFL_00330
(tbpA)
View Structure
2
884891-885035
(+)
MOCO
886033-886546 (+)
moaB
WFL_04065
Operon
DOOR ID:
1081037
WFL_04060
(moaA)
,
WFL_04065
(moaB)
,
WFL_04070
(moaC)
,
WFL_04075
(moaD)
,
WFL_04080
(moaE)
View Structure
3
2050169-2050270
(+)
yybP-ykoY
2050400-2050967 (+)
WFL_09780
WFL_09780
Single gene
DOOR ID:
3754614
WFL_09780
View Structure
4
2350505-2350601
(-)
TPP
2349681-2350470 (-)
thiM
WFL_11280
Operon
DOOR ID:
1081300
WFL_11265
(yegW)
,
WFL_11270
(yegX)
,
WFL_11275
(thiD)
,
WFL_11280
(thiM)
View Structure
5
3395221-3395369
(-)
FMN
3394463-3395117 (-)
ribB
WFL_16170
Single gene
DOOR ID:
3754999
WFL_16170
(ribB)
View Structure
6
4424513-4424703
(+)
cobalamin
4424767-4426612 (+)
btuB
WFL_21085
Operon
DOOR ID:
1081705
WFL_21085
(btuB)
,
WFL_21090
(murI)
View Structure
7
4456388-4456488
(-)
TPP
4454411-4456307 (-)
thiC
WFL_21185
Operon
DOOR ID:
1081710
WFL_21160
(thiH)
,
WFL_21165
(thiG)
,
WFL_21170
(thiS)
,
WFL_21175
(thiF)
,
WFL_21180
(thiE)
,
WFL_21185
(thiC)
View Structure
8
4495670-4495866
(-)
lysine
4494228-4495578 (-)
lysC
WFL_21325
Single gene
DOOR ID:
3755347
WFL_21325
(lysC)
View Structure
9
4631079-4631125
(+)
mini-ykkC
4631142-4631460 (+)
sugE
WFL_21955
Single gene
DOOR ID:
3755411
WFL_21955
(sugE)
View Structure
10
4722257-4722372
(+)
Mg sensor
4722465-4725162 (+)
mgtA
WFL_22405
Single gene
DOOR ID:
3755454
WFL_22405
(mgtA)
View Structure
Genome:
Escherichia coli W
(
NC_017664.1
);
Phylum:
Gammaproteobacteria
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