Genome: Escherichia coli O7:K1 str. CE10 (NC_017646.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 84520-84619 (-)TPP83505-84489 (-)thiB

Thiamin transporter subunit

DOOR ID: 1281057
CE10_0071 (thiB),
CE10_0070 (thiP),
CE10_0069 (thiQ)
View Structure
2 850284-850428 (+)MOCO851426-851939 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 1281204
CE10_0801 (moaA),
CE10_0802 (moaB),
CE10_0803 (moaC),
CE10_0804 (moaD),
CE10_0805 (moaE)
View Structure
3 2124386-2124487 (+)yybP-ykoY2124617-2125184 (+)yebN

Probable manganese efflux pump MntP
CE10_2104Single gene

DOOR ID: 3743387
CE10_2104 (yebN) View Structure
4 2448357-2448453 (-)TPP2447533-2448322 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 1281487
CE10_2415 (yegW),
CE10_2416 (yegX),
CE10_2417 (thiD),
CE10_2418 (thiM)
View Structure
5 3641013-3641161 (-)FMN3640255-3640909 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
CE10_3571Single gene

DOOR ID: 3743852
CE10_3571 (ribB) View Structure
6 4737650-4737840 (+)cobalamin4737904-4739749 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 1281927
CE10_4640 (btuB),
CE10_4641 (murI)
View Structure
7 4775613-4775713 (-)TPP4773636-4775532 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 1281934
CE10_4669 (thiH),
CE10_4670 (thiG),
CE10_4671 (thiS),
CE10_4672 (thiF),
CE10_4673 (thiE),
CE10_4674 (thiC)
View Structure
8 4837215-4837411 (-)lysine4835773-4837123 (-)lysC

CE10_4739Single gene

DOOR ID: 3744238
CE10_4739 (lysC) View Structure
9 4996084-4996130 (+)mini-ykkC4996147-4996465 (+)sugE

CE10_4889Single gene

DOOR ID: 3744309
CE10_4889 (sugE) View Structure
10 5096022-5096137 (+)Mg sensor5096230-5098927 (+)mgtA

Magnesium transporter
CE10_4989Single gene

DOOR ID: 3744353
CE10_4989 (mgtA) View Structure