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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
69266-69365
(-)
TPP
68251-69235 (-)
tbpA
ECNA114_0062
Operon
DOOR ID:
1280069
ECNA114_0064
(yabN)
,
ECNA114_0063,
ECNA114_0062
(tbpA)
,
ECNA114_0061
(thiP)
,
ECNA114_0060
(thiQ)
View Structure
2
776623-776767
(+)
MOCO
777765-778278 (+)
moaB
ECNA114_0714
Operon
DOOR ID:
1280203
ECNA114_0717
(moaE)
,
ECNA114_0716
(moaD)
,
ECNA114_0715
(moaC)
,
ECNA114_0714
(moaB)
,
ECNA114_0713
(moaA)
View Structure
3
1872138-1872239
(+)
yybP-ykoY
1872369-1872936 (+)
ECNA114_1866
ECNA114_1866
Single gene
DOOR ID:
3741463
ECNA114_1866
View Structure
4
2205578-2205674
(-)
TPP
2204754-2205543 (-)
thiM
ECNA114_2195
Operon
DOOR ID:
1280480
ECNA114_2195
(thiM)
,
ECNA114_2194
(thiD)
,
ECNA114_2193
(yegX)
,
ECNA114_2192
(yegW)
View Structure
5
3224395-3224543
(-)
FMN
3223637-3224291 (-)
ribH1
ECNA114_3140
Single gene
DOOR ID:
3741876
ECNA114_3140
(ribH1)
View Structure
6
3497006-3497106
(+)
TPP
3497186-3499082 (+)
thiC
ECNA114_3429
Operon
DOOR ID:
1280749
ECNA114_3430
(thiE)
,
ECNA114_3429
(thiC)
View Structure
7
4230965-4231155
(+)
cobalamin
4231219-4233064 (+)
btuB
ECNA114_4108
Operon
DOOR ID:
1280892
ECNA114_4109
(murI)
,
ECNA114_4108
(btuB)
View Structure
8
4316046-4316242
(-)
lysine
4314604-4315954 (-)
lysC
ECNA114_4180
Single gene
DOOR ID:
3742210
ECNA114_4180
(lysC)
View Structure
9
4523688-4523734
(+)
mini-ykkC
4523751-4524069 (+)
sugE
ECNA114_4368
Single gene
DOOR ID:
3742283
ECNA114_4368
(sugE)
View Structure
10
4621691-4621806
(+)
Mg sensor
4621899-4624596 (+)
mgtA
ECNA114_4465
Single gene
DOOR ID:
3742327
ECNA114_4465
(mgtA)
View Structure
Genome:
Escherichia coli NA114
(
NC_017644.1
);
Phylum:
Gammaproteobacteria
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