Genome: Escherichia coli UMNK88 (NC_017641.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 77503-77602 (-)TPP76488-77472 (-)thiB

Thiamin transporter subunit ThiB		UMNK88_66Operon

DOOR ID: 1279063		UMNK88_64 (thiQ),
UMNK88_65 (thiP),
UMNK88_66 (thiB)		 View Structure
2 842530-842674 (+)MOCO843672-844185 (+)moaB

Molybdenum cofactor biosynthesis protein B		UMNK88_822Operon

DOOR ID: 1279207		UMNK88_821 (moaA),
UMNK88_822 (moaB),
UMNK88_823 (moaC),
UMNK88_824 (moaD),
UMNK88_825		 View Structure
3 2211210-2211311 (+)yybP-ykoY2211323-2211446 (+)UMNK88_2291

UMNK88_2291Operon

DOOR ID: 1279459		UMNK88_2291,
UMNK88_2293		 View Structure
4 2539085-2539181 (-)TPP2538261-2539050 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		UMNK88_2647Operon

DOOR ID: 1279529		UMNK88_2643,
UMNK88_2645,
UMNK88_2646 (thiD),
UMNK88_2647 (thiM)		 View Structure
5 3672149-3672297 (-)FMN3671391-3672045 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		UMNK88_3794Single gene

DOOR ID: 3740018		UMNK88_3794 (ribB) View Structure
6 4681840-4682030 (+)cobalamin4682094-4683978 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		UMNK88_4804Operon

DOOR ID: 1279955		UMNK88_4804 (btuB),
UMNK88_4805 (murI)		 View Structure
7 4714682-4714782 (-)TPP4712705-4714601 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		UMNK88_4835Operon

DOOR ID: 1279960		UMNK88_4830 (thiH),
UMNK88_4831,
UMNK88_4832 (thiS),
UMNK88_4833 (thiF),
UMNK88_4834 (thiE),
UMNK88_4835 (thiC)		 View Structure
8 4757372-4757568 (-)lysine4755930-4757280 (-)UMNK88_4876

Aspartokinase 		UMNK88_4876Single gene

DOOR ID: 3740391		UMNK88_4876 View Structure
9 4965681-4965727 (+)mini-ykkC4965744-4966062 (+)UMNK88_5089

UMNK88_5089Single gene

DOOR ID: 3740475		UMNK88_5089 View Structure
10 5060219-5060334 (+)Mg sensor5060427-5063124 (+)mgtA

Magnesium-translocating P-type ATPase MgtA		UMNK88_5189Single gene

DOOR ID: 3740523		UMNK88_5189 (mgtA) View Structure