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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
75512-75611
(-)
TPP
74497-75481 (-)
tbpA
ECDH1ME8569_0067
Operon
DOOR ID:
1278195
ECDH1ME8569_0067
(tbpA)
,
ECDH1ME8569_0066
(thiP)
,
ECDH1ME8569_0065
(thiQ)
View Structure
2
805905-806049
(+)
MOCO
807047-807560 (+)
moaB
ECDH1ME8569_0735
Operon
DOOR ID:
1278344
ECDH1ME8569_0738
(moaE)
,
ECDH1ME8569_0737
(moaD)
,
ECDH1ME8569_0736
(moaC)
,
ECDH1ME8569_0735
(moaB)
,
ECDH1ME8569_0734
(moaA)
View Structure
3
1888837-1888938
(+)
yybP-ykoY
1889068-1889635 (+)
yebN
ECDH1ME8569_1766
Single gene
DOOR ID:
3737565
ECDH1ME8569_1766
(yebN)
View Structure
4
2170330-2170426
(-)
TPP
2169506-2170295 (-)
thiM
ECDH1ME8569_2038
Operon
DOOR ID:
1278588
ECDH1ME8569_2035
(yegW)
,
ECDH1ME8569_2036
(yegX)
,
ECDH1ME8569_2037
(thiD)
,
ECDH1ME8569_2038
(thiM)
View Structure
5
3162477-3162625
(-)
FMN
3161719-3162373 (-)
ribB
ECDH1ME8569_2938
Single gene
DOOR ID:
3737949
ECDH1ME8569_2938
(ribB)
View Structure
6
4142489-4142679
(+)
cobalamin
4142743-4144588 (+)
btuB
ECDH1ME8569_3834
Operon
DOOR ID:
1278960
ECDH1ME8569_3834
(btuB)
,
ECDH1ME8569_3835
(murI)
View Structure
7
4175285-4175385
(-)
TPP
4173308-4175204 (-)
thiC
ECDH1ME8569_3854
Operon
DOOR ID:
1278965
ECDH1ME8569_3849
(thiH)
,
ECDH1ME8569_3850
(thiG)
,
ECDH1ME8569_3851
(thiS)
,
ECDH1ME8569_3852
(thiF)
,
ECDH1ME8569_3853
(thiE)
,
ECDH1ME8569_3854
(thiC)
View Structure
8
4212430-4212626
(-)
lysine
4210988-4212338 (-)
lysC
ECDH1ME8569_3880
Single gene
DOOR ID:
3738280
ECDH1ME8569_3880
(lysC)
View Structure
9
4355805-4355851
(+)
mini-ykkC
4355868-4356186 (+)
sugE
ECDH1ME8569_4008
Single gene
DOOR ID:
3738339
ECDH1ME8569_4008
(sugE)
View Structure
Genome:
Escherichia coli DH1
(
NC_017638.1
);
Phylum:
Gammaproteobacteria
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