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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
78440-78539
(-)
TPP
77425-78409 (-)
thiB
ECABU_c00760
Operon
DOOR ID:
1273547
ECABU_c00760
(thiB)
,
ECABU_c00750
(thiP)
,
ECABU_c00740
(thiQ)
View Structure
2
847843-847987
(+)
MOCO
848985-849498 (+)
moaB
ECABU_c08240
Operon
DOOR ID:
1273687
ECABU_c08230
(moaA)
,
ECABU_c08240
(moaB)
,
ECABU_c08250
(moaC)
,
ECABU_c08260
(moaD)
,
ECABU_c08270
(moaE)
View Structure
3
2055755-2055856
(+)
yybP-ykoY
2055986-2056553 (+)
yebN
ECABU_c20810
Single gene
DOOR ID:
3728924
ECABU_c20810
(yebN)
View Structure
4
2447484-2447580
(-)
TPP
2446660-2447449 (-)
thiM
ECABU_c24340
Operon
DOOR ID:
1273962
ECABU_c24310
(yegW)
,
ECABU_c24320
(yegX)
,
ECABU_c24330
(thiD)
,
ECABU_c24340
(thiM)
View Structure
5
3534510-3534658
(-)
FMN
3533752-3534406 (-)
ribB
ECABU_c34640
Single gene
DOOR ID:
3729334
ECABU_c34640
(ribB)
View Structure
6
4564646-4564836
(+)
cobalamin
4564858-4566745 (+)
btuB
ECABU_c44810
Operon
DOOR ID:
1274378
ECABU_c44810
(btuB)
,
ECABU_c44820
(murI)
View Structure
7
4596151-4596251
(-)
TPP
4594174-4596070 (-)
thiC
ECABU_c45100
Operon
DOOR ID:
1274383
ECABU_c45050
(thiH)
,
ECABU_c45060
(thiG)
,
ECABU_c45070
(thiS)
,
ECABU_c45080
(thiF)
,
ECABU_c45090
(thiE)
,
ECABU_c45100
(thiC)
View Structure
8
4637759-4637955
(-)
lysine
4636317-4637667 (-)
lysC
ECABU_c45470
Single gene
DOOR ID:
3729664
ECABU_c45470
(lysC)
View Structure
9
4801878-4801924
(+)
mini-ykkC
4801941-4802259 (+)
sugE
ECABU_c47070
Single gene
DOOR ID:
3729719
ECABU_c47070
(sugE)
View Structure
10
4900838-4900953
(+)
Mg sensor
4901046-4903743 (+)
mgtA
ECABU_c48080
Single gene
DOOR ID:
3729762
ECABU_c48080
(mgtA)
View Structure
Genome:
Escherichia coli ABU 83972
(
NC_017631.1
);
Phylum:
Gammaproteobacteria
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