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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
250693-250886
(+)
cobalamin
250951-252796 (+)
SU5_0221
SU5_0221
Operon
DOOR ID:
1072879
SU5_0221,
SU5_0222
View Structure
2
282910-283073
(-)
TPP
280928-282824 (-)
SU5_0243
SU5_0243
Operon
DOOR ID:
1072885
SU5_0236,
SU5_0237,
SU5_0238,
SU5_0239,
SU5_0240,
SU5_0241,
SU5_0242,
SU5_0243
View Structure
3
482381-482425
(+)
mini-ykkC
482446-482764 (+)
sugE
SU5_0412
Operon
DOOR ID:
1073633
SU5_04127,
SU5_04128
View Structure
4
577581-577693
(+)
Mg sensor
577741-580498 (+)
SU5_0505
SU5_0505
Single gene
DOOR ID:
3721092
SU5_0505
View Structure
5
856569-856668
(-)
TPP
855553-856537 (-)
SU5_0741
SU5_0741
Operon
DOOR ID:
1072987
SU5_0739,
SU5_0740,
SU5_0741
View Structure
6
1652226-1652370
(+)
MOCO
1653368-1653881 (+)
SU5_01474
SU5_01474
Operon
DOOR ID:
1073137
SU5_01473,
SU5_01474,
SU5_01475,
SU5_01476,
SU5_01477,
SU5_01478
View Structure
7
2669111-2669212
(+)
yybP-ykoY
2669886-2670696 (-)
SU5_02437
SU5_02437
Operon
DOOR ID:
1073313
SU5_02437,
SU5_02438
View Structure
8
2849694-2849869
(-)
cobalamin
2848217-2849597 (-)
SU5_02629
SU5_02629
Operon
DOOR ID:
1073344
SU5_02609,
SU5_02610,
SU5_02611,
SU5_02612,
SU5_02613,
SU5_02614,
SU5_02615,
SU5_02616,
SU5_02617,
SU5_02618,
SU5_02619,
SU5_02620,
SU5_02621,
SU5_02622,
SU5_02623,
SU5_02624,
SU5_02625,
SU5_02626,
SU5_02627,
SU5_02628,
SU5_02629
View Structure
9
2977667-2977763
(-)
TPP
2976837-2977635 (-)
SU5_02740
SU5_02740
Operon
DOOR ID:
1073359
SU5_02738,
SU5_02739,
SU5_02740
View Structure
10
4039132-4039330
(-)
FMN
4038372-4039026 (-)
SU5_03691
SU5_03691
Single gene
DOOR ID:
3722358
SU5_03691
View Structure
Genome:
Salmonella enterica subsp. enterica serovar Heidelberg str. B182
(
NC_017623.1
);
Phylum:
Gammaproteobacteria
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B182 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"250693-250886";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"250951-252796";i:10;s:1:"+";i:11;s:8:"SU5_0221";i:12;s:0:"";i:13;s:8:"SU5_0221";i:14;s:6:"Operon";i:15;s:7:"1072879";i:16;s:17:"SU5_0221;SU5_0222";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_017623.1";i:2;s:65:"Salmonella enterica subsp. enterica serovar Heidelberg str. B182 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"282910-283073";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"280928-282824";i:10;s:1:"-";i:11;s:8:"SU5_0243";i:12;s:0:"";i:13;s:8:"SU5_0243";i:14;s:6:"Operon";i:15;s:7:"1072885";i:16;s:71:"SU5_0236;SU5_0237;SU5_0238;SU5_0239;SU5_0240;SU5_0241;SU5_0242;SU5_0243";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_017623.1";i:2;s:65:"Salmonella enterica subsp. enterica serovar Heidelberg str. 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B182 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"2849694-2849869";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2848217-2849597";i:10;s:1:"-";i:11;s:9:"SU5_02629";i:12;s:0:"";i:13;s:9:"SU5_02629";i:14;s:6:"Operon";i:15;s:7:"1073344";i:16;s:209:"SU5_02609;SU5_02610;SU5_02611;SU5_02612;SU5_02613;SU5_02614;SU5_02615;SU5_02616;SU5_02617;SU5_02618;SU5_02619;SU5_02620;SU5_02621;SU5_02622;SU5_02623;SU5_02624;SU5_02625;SU5_02626;SU5_02627;SU5_02628;SU5_02629";i:17;s:0:"";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_017623.1";i:2;s:65:"Salmonella enterica subsp. enterica serovar Heidelberg str. B182 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"2977667-2977763";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"2976837-2977635";i:10;s:1:"-";i:11;s:9:"SU5_02740";i:12;s:0:"";i:13;s:9:"SU5_02740";i:14;s:6:"Operon";i:15;s:7:"1073359";i:16;s:29:"SU5_02738;SU5_02739;SU5_02740";i:17;s:0:"";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_017623.1";i:2;s:65:"Salmonella enterica subsp. enterica serovar Heidelberg str. B182 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"4039132-4039330";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"4038372-4039026";i:10;s:1:"-";i:11;s:9:"SU5_03691";i:12;s:0:"";i:13;s:9:"SU5_03691";i:14;s:11:"Single gene";i:15;s:7:"3722358";i:16;s:9:"SU5_03691";i:17;s:0:"";i:18;s:15:"View Structure ";}}