RiboswitchDB

Genome: Streptococcus suis SS12 (NC_017619.1); Phylum: Firmicutes

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

125993-126137 (+)

THF

126181-126733 (+)

SSU12_0136

Single gene

DOOR ID: 3718288

SSU12_0136

2

236860-236964 (+)

glycine

237070-238405 (+)

SSU12_0233

Single gene

DOOR ID: 3718329

SSU12_0233

3

507116-507211 (-)

TPP

506508-507057 (-)

SSU12_0482

Single gene

DOOR ID: 3718424

SSU12_0482

4

713789-713878 (+)

TPP

714212-714860 (+)

SSU12_0684

Operon

DOOR ID: 1371688

SSU12_0687 (thiE),
SSU12_0686,
SSU12_0685,
SSU12_0684

5

1546244-1546346 (-)

preQ1-II

1544772-1545615 (-)

SSU12_1560

Operon

DOOR ID: 1371887

SSU12_1560,
SSU12_1559,
SSU12_1558

6

1620990-1621204 (-)

FMN

1620373-1620931 (-)

SSU12_1641

Operon

DOOR ID: 1371906

SSU12_1641,
SSU12_1640

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