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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
206033-206147
(-)
FMN
204798-205899 (-)
ribD
SPNOXC_02080
Operon
DOOR ID:
1069002
SPNOXC_02050
(ribH)
,
SPNOXC_02060
(ribA)
,
SPNOXC_02070
(ribE)
,
SPNOXC_02080
(ribD)
View Structure
2
394525-394613
(+)
glycine
394703-396026 (+)
SPNOXC_03960
SPNOXC_03960
Single gene
DOOR ID:
3714579
SPNOXC_03960
View Structure
3
453059-453277
(+)
FMN
453441-454005 (+)
SPNOXC_04550
SPNOXC_04550
Operon
DOOR ID:
1069050
SPNOXC_04550,
SPNOXC_04560,
SPNOXC_04570,
SPNOXC_04580,
SPNOXC_04590
(rpoE)
View Structure
4
652463-652551
(+)
TPP
652765-653434 (+)
SPNOXC_06480
SPNOXC_06480
Single gene
DOOR ID:
3714621
SPNOXC_06480
View Structure
5
655338-655426
(+)
TPP
655687-656248 (+)
SPNOXC_06510
SPNOXC_06510
Operon
DOOR ID:
1069091
SPNOXC_06510,
SPNOXC_06520,
SPNOXC_06530,
SPNOXC_06540,
SPNOXC_06550,
SPNOXC_06560,
SPNOXC_06570
(thiE)
View Structure
6
662030-662128
(-)
TPP
661154-661946 (-)
thiD
SPNOXC_06580
Single gene
DOOR ID:
3714622
SPNOXC_06580
(thiD)
View Structure
7
921891-921987
(+)
preQ1-II
922592-922666 (+)
SPNOXC_t45
SPNOXC_t45
Single gene
DOOR ID:
3714811
SPNOXC_t45
View Structure
8
1643512-1643607
(+)
purine
1643957-1644539 (+)
xpt
SPNOXC_16200
Operon
DOOR ID:
1069275
SPNOXC_16200
(xpt)
,
SPNOXC_16210
(pbuX)
View Structure
9
1997467-1997569
(-)
TPP
1997105-1997396 (-)
SPNOXC_19420
SPNOXC_19420
Operon
DOOR ID:
1069333
SPNOXC_19370
(clpC)
,
SPNOXC_19380
(ctsR)
,
SPNOXC_19390,
SPNOXC_19400,
SPNOXC_19410,
SPNOXC_19420
View Structure
Genome:
Streptococcus pneumoniae OXC141
(
NC_017592.1
);
Phylum:
Firmicutes
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