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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
169834-169948
(-)
FMN
168598-169699 (-)
ribD
INV104_01460
Operon
DOOR ID:
1370272
INV104_01430
(ribH)
,
INV104_01440
(ribA)
,
INV104_01450
(ribE)
,
INV104_01460
(ribD)
View Structure
2
393072-393160
(+)
glycine
393250-394573 (+)
INV104_03510
INV104_03510
Single gene
DOOR ID:
3713947
INV104_03510
View Structure
3
458893-459127
(+)
FMN
459291-459855 (+)
INV104_04120
INV104_04120
Operon
DOOR ID:
1370328
INV104_04120,
INV104_04130
View Structure
4
671251-671339
(+)
TPP
671553-672222 (+)
INV104_05950
INV104_05950
Single gene
DOOR ID:
3714030
INV104_05950
View Structure
5
674087-674175
(+)
TPP
674436-674997 (+)
INV104_05980
INV104_05980
Operon
DOOR ID:
1370373
INV104_05980,
INV104_05990,
INV104_06000
View Structure
6
680779-680877
(-)
TPP
679903-680695 (-)
thiD
INV104_06050
Single gene
DOOR ID:
3714031
INV104_06050
(thiD)
View Structure
7
969522-969618
(+)
preQ1-II
970223-970297 (+)
INV104_t51
INV104_t51
Single gene
DOOR ID:
3714458
INV104_t51
View Structure
8
1736938-1737033
(+)
purine
1737432-1738014 (+)
xpt
INV104_15850
Operon
DOOR ID:
1370574
INV104_15850
(xpt)
,
INV104_15860
(pbuX)
View Structure
9
2101062-2101164
(-)
TPP
2100700-2100991 (-)
INV104_19010
INV104_19010
Operon
DOOR ID:
1370639
INV104_18980,
INV104_18990,
INV104_19000,
INV104_19010
View Structure
Genome:
Streptococcus pneumoniae INV104
(
NC_017591.1
);
Phylum:
Firmicutes
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