RiboswitchDB

Genome: Spirochaeta thermophila DSM 6578 (NC_017583.1); Phylum: Spirochaetia

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

167673-167782 (-)

TPP

167367-167565 (-)

Spith_0136

Thiamine biosynthesis protein ThiS

Operon

DOOR ID: 1067822

Spith_0131,
Spith_0132,
Spith_0133,
Spith_0134,
Spith_0135,
Spith_0136

2

201465-201550 (-)

ZMP-ZTP

199931-201440 (-)

Spith_0158

Serine hydroxymethyltransferase (SHMT) (Serine methylase)

Single gene

DOOR ID: 3708191

Spith_0158

3

1799841-1799889 (+)

glutamine

1799982-1800324 (-)

Spith_1598

DNA polymerase beta domain protein region

Operon

DOOR ID: 1068093

Spith_1598,
Spith_1599

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