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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
218701-218891
(-)
cobalamin
215784-216831 (-)
RIA_0250
RIA_0250
Operon
DOOR ID:
1369101
RIA_0251,
RIA_0250
View Structure
2
343214-343316
(-)
SAM
342132-343146 (-)
RIA_0390
RIA_0390
Operon
DOOR ID:
1369132
RIA_0390,
RIA_0389,
RIA_0388
View Structure
3
583609-583713
(+)
SAM
583773-584712 (+)
RIA_0611
RIA_0611
Operon
DOOR ID:
1369185
RIA_0611,
RIA_0612,
RIA_0613
View Structure
4
635123-635213
(+)
TPP
635282-637400 (+)
RIA_0649
RIA_0649
Single gene
DOOR ID:
3699542
RIA_0649
View Structure
5
1782664-1782753
(+)
TPP
1782794-1783535 (+)
RIA_1781
RIA_1781
Operon
DOOR ID:
1369428
RIA_1781,
RIA_1782,
RIA_1783,
RIA_1784
View Structure
Genome:
Riemerella anatipestifer RA-GD
(
NC_017569.1
);
Phylum:
Bacteroidetes/Chlorobi group
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