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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
133010-133104
(+)
TPP
134841-135018 (+)
TIB1ST10_00570
TIB1ST10_00570
Operon
DOOR ID:
1365667
TIB1ST10_00575
(thiE)
,
TIB1ST10_00570
View Structure
2
186523-186626
(+)
TPP
186660-187290 (+)
TIB1ST10_00785
TIB1ST10_00785
Operon
DOOR ID:
1365678
TIB1ST10_00790,
TIB1ST10_00785
View Structure
3
387564-387749
(-)
cobalamin
386502-387537 (-)
TIB1ST10_01720
TIB1ST10_01720
Operon
DOOR ID:
1365717
TIB1ST10_01720,
TIB1ST10_01715,
TIB1ST10_01710
View Structure
4
463678-463815
(+)
cobalamin
463846-464602 (+)
TIB1ST10_02140
TIB1ST10_02140
Operon
DOOR ID:
1365736
TIB1ST10_02155,
TIB1ST10_02150,
TIB1ST10_02145,
TIB1ST10_02140
View Structure
5
470738-470916
(+)
cobalamin
470958-472023 (+)
TIB1ST10_02170
TIB1ST10_02170
Operon
DOOR ID:
1365737
TIB1ST10_02180,
TIB1ST10_02175,
TIB1ST10_02170,
TIB1ST10_02165
View Structure
6
480461-480575
(+)
cobalamin
480617-481232 (+)
TIB1ST10_02225
TIB1ST10_02225
Operon
DOOR ID:
1365739
TIB1ST10_02235,
TIB1ST10_02230,
TIB1ST10_02225
View Structure
7
485238-485345
(+)
cobalamin
485436-487107 (+)
TIB1ST10_02245
TIB1ST10_02245
Operon
DOOR ID:
1365740
TIB1ST10_02255,
TIB1ST10_02250,
TIB1ST10_02245
View Structure
8
574263-574374
(-)
TPP
572746-573016 (-)
TIB1ST10_02675
TIB1ST10_02675
Operon
DOOR ID:
1365758
TIB1ST10_02680,
TIB1ST10_02675,
TIB1ST10_02670
(thiG)
,
TIB1ST10_02665
View Structure
9
656866-657118
(+)
cobalamin
657197-659108 (+)
TIB1ST10_03080
TIB1ST10_03080
Operon
DOOR ID:
1365775
TIB1ST10_03085,
TIB1ST10_03080
View Structure
10
720173-720359
(+)
cobalamin
720399-721413 (+)
TIB1ST10_03375
TIB1ST10_03375
Operon
DOOR ID:
1365790
TIB1ST10_03390,
TIB1ST10_03385,
TIB1ST10_03380,
TIB1ST10_03375
View Structure
11
865215-865357
(+)
cobalamin
865778-866933 (+)
TIB1ST10_04060
TIB1ST10_04060
Single gene
DOOR ID:
3672150
TIB1ST10_04060
View Structure
12
962712-962825
(+)
TPP
963613-964264 (+)
TIB1ST10_04580
TIB1ST10_04580
Operon
DOOR ID:
1365839
TIB1ST10_04580,
TIB1ST10_04575
View Structure
13
1820343-1820411
(-)
cobalamin
1817354-1817921 (-)
TIB1ST10_08550
TIB1ST10_08550
Single gene
DOOR ID:
3672444
TIB1ST10_08550
View Structure
14
1913648-1913782
(-)
FMN
1912578-1913574 (-)
TIB1ST10_09005
TIB1ST10_09005
Operon
DOOR ID:
1366028
TIB1ST10_08980
(purH)
,
TIB1ST10_08985
(purN)
,
TIB1ST10_08990
(ribH)
,
TIB1ST10_08995,
TIB1ST10_09000,
TIB1ST10_09005
View Structure
15
2066330-2066397
(+)
cobalamin
2066705-2068772 (+)
TIB1ST10_09725
TIB1ST10_09725
Operon
DOOR ID:
1366056
TIB1ST10_09725,
TIB1ST10_09730
View Structure
16
2153999-2154066
(+)
cobalamin
2156278-2156440 (-)
TIB1ST10_10105
TIB1ST10_10105
Single gene
DOOR ID:
3672563
TIB1ST10_10105
View Structure
17
2294584-2294784
(+)
cobalamin
2294895-2297466 (+)
TIB1ST10_10770
TIB1ST10_10770
Operon
DOOR ID:
1366096
TIB1ST10_10770,
TIB1ST10_10775
(nrdF)
View Structure
18
2317494-2317735
(-)
cobalamin
2315075-2317418 (-)
TIB1ST10_10870
TIB1ST10_10870
Operon
DOOR ID:
1366100
TIB1ST10_10865,
TIB1ST10_10870
View Structure
Genome:
Propionibacterium acnes 6609
(
NC_017535.1
);
Phylum:
Actinobacteria
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";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"574263-574374";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"572746-573016";i:10;s:1:"-";i:11;s:14:"TIB1ST10_02675";i:12;s:0:"";i:13;s:14:"TIB1ST10_02675";i:14;s:6:"Operon";i:15;s:7:"1365758";i:16;s:65:"TIB1ST10_02680;TIB1ST10_02675;TIB1ST10_02670(thiG);TIB1ST10_02665";i:17;s:0:"";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"656866-657118";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"657197-659108";i:10;s:1:"+";i:11;s:14:"TIB1ST10_03080";i:12;s:0:"";i:13;s:14:"TIB1ST10_03080";i:14;s:6:"Operon";i:15;s:7:"1365775";i:16;s:29:"TIB1ST10_03085;TIB1ST10_03080";i:17;s:0:"";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"720173-720359";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"720399-721413";i:10;s:1:"+";i:11;s:14:"TIB1ST10_03375";i:12;s:0:"";i:13;s:14:"TIB1ST10_03375";i:14;s:6:"Operon";i:15;s:7:"1365790";i:16;s:59:"TIB1ST10_03390;TIB1ST10_03385;TIB1ST10_03380;TIB1ST10_03375";i:17;s:0:"";i:18;s:15:"View Structure ";}i:11;a:19:{i:0;i:11;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"865215-865357";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"865778-866933";i:10;s:1:"+";i:11;s:14:"TIB1ST10_04060";i:12;s:0:"";i:13;s:14:"TIB1ST10_04060";i:14;s:11:"Single gene";i:15;s:7:"3672150";i:16;s:14:"TIB1ST10_04060";i:17;s:0:"";i:18;s:15:"View Structure ";}i:12;a:19:{i:0;i:12;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:13:"962712-962825";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"963613-964264";i:10;s:1:"+";i:11;s:14:"TIB1ST10_04580";i:12;s:0:"";i:13;s:14:"TIB1ST10_04580";i:14;s:6:"Operon";i:15;s:7:"1365839";i:16;s:29:"TIB1ST10_04580;TIB1ST10_04575";i:17;s:0:"";i:18;s:15:"View Structure ";}i:13;a:19:{i:0;i:13;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1820343-1820411";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1817354-1817921";i:10;s:1:"-";i:11;s:14:"TIB1ST10_08550";i:12;s:0:"";i:13;s:14:"TIB1ST10_08550";i:14;s:11:"Single gene";i:15;s:7:"3672444";i:16;s:14:"TIB1ST10_08550";i:17;s:0:"";i:18;s:15:"View Structure ";}i:14;a:19:{i:0;i:14;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"1913648-1913782";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1912578-1913574";i:10;s:1:"-";i:11;s:14:"TIB1ST10_09005";i:12;s:0:"";i:13;s:14:"TIB1ST10_09005";i:14;s:6:"Operon";i:15;s:7:"1366028";i:16;s:107:"TIB1ST10_08980(purH);TIB1ST10_08985(purN);TIB1ST10_08990(ribH);TIB1ST10_08995;TIB1ST10_09000;TIB1ST10_09005";i:17;s:0:"";i:18;s:15:"View Structure ";}i:15;a:19:{i:0;i:15;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2066330-2066397";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2066705-2068772";i:10;s:1:"+";i:11;s:14:"TIB1ST10_09725";i:12;s:0:"";i:13;s:14:"TIB1ST10_09725";i:14;s:6:"Operon";i:15;s:7:"1366056";i:16;s:29:"TIB1ST10_09725;TIB1ST10_09730";i:17;s:0:"";i:18;s:15:"View Structure ";}i:16;a:19:{i:0;i:16;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2153999-2154066";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2156278-2156440";i:10;s:1:"-";i:11;s:14:"TIB1ST10_10105";i:12;s:0:"";i:13;s:14:"TIB1ST10_10105";i:14;s:11:"Single gene";i:15;s:7:"3672563";i:16;s:14:"TIB1ST10_10105";i:17;s:0:"";i:18;s:15:"View Structure ";}i:17;a:19:{i:0;i:17;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2294584-2294784";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2294895-2297466";i:10;s:1:"+";i:11;s:14:"TIB1ST10_10770";i:12;s:0:"";i:13;s:14:"TIB1ST10_10770";i:14;s:6:"Operon";i:15;s:7:"1366096";i:16;s:35:"TIB1ST10_10770;TIB1ST10_10775(nrdF)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:18;a:19:{i:0;i:18;i:1;s:11:"NC_017535.1";i:2;s:29:"Propionibacterium acnes 6609 ";i:3;s:14:"Actinobacteria";i:4;s:6:"201174";i:5;s:15:"2317494-2317735";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"2315075-2317418";i:10;s:1:"-";i:11;s:14:"TIB1ST10_10870";i:12;s:0:"";i:13;s:14:"TIB1ST10_10870";i:14;s:6:"Operon";i:15;s:7:"1366100";i:16;s:29:"TIB1ST10_10865;TIB1ST10_10870";i:17;s:0:"";i:18;s:15:"View Structure ";}}