Genome: Pseudomonas stutzeri DSM 4166 (NC_017532.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 843504-843642 (+)FMN843762-844425 (+)ribE-1

RibE-1 protein		PSTAA_0776Operon

DOOR ID: 1261942		PSTAA_0776 (ribE-1),
PSTAA_0777 (ribBA-1),
PSTAA_0778 (ribH),
PSTAA_0779 (nusB),
PSTAA_0780 (thiL),
PSTAA_0781		 View Structure
2 852715-852931 (-)cobalamin850761-852618 (-)PSTAA_0786

TonB-dependent receptor; plug		PSTAA_0786Single gene

DOOR ID: 3669845		PSTAA_0786 View Structure
3 1161052-1161174 (-)yybP-ykoY1160372-1160960 (-)PSTAA_1076

PSTAA_1076Single gene

DOOR ID: 3669944		PSTAA_1076 View Structure
4 1404425-1404644 (+)cobalamin1404761-1406615 (+)PSTAA_1321

TonB-dependent receptor		PSTAA_1321Operon

DOOR ID: 1262049		PSTAA_1321,
PSTAA_1322,
PSTAA_1323 (cobO)		 View Structure
5 2166139-2166241 (-)ykkC-yxkD2165088-2166090 (-)PSTAA_2033

ABC-type nitrate/sulfonate/bicarbonate transport system; periplasmic component		PSTAA_2033Operon

DOOR ID: 1262181		PSTAA_2024,
PSTAA_2025,
PSTAA_2026,
PSTAA_2027,
PSTAA_2028,
PSTAA_2029,
PSTAA_2030,
PSTAA_2031,
PSTAA_2032,
PSTAA_2033		 View Structure
6 2173198-2173244 (-)mini-ykkC2169574-2173174 (-)PSTAA_2036

PSTAA_2036Operon

DOOR ID: 1262183		PSTAA_2036,
PSTAA_2037,
PSTAA_2038,
PSTAA_2039,
PSTAA_2040,
PSTAA_2041		 View Structure
7 2176543-2176640 (-)ykkC-yxkD2175595-2176411 (-)PSTAA_2041

ABC transporter; permease protein		PSTAA_2041Operon

DOOR ID: 1262183		PSTAA_2036,
PSTAA_2037,
PSTAA_2038,
PSTAA_2039,
PSTAA_2040,
PSTAA_2041		 View Structure
8 3842849-3842895 (-)mini-ykkC3842507-3842828 (-)sugE

PSTAA_3588Single gene

DOOR ID: 3670877		PSTAA_3588 (sugE) View Structure
9 4200791-4200897 (-)TPP4198810-4200694 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		PSTAA_3925Single gene

DOOR ID: 3670996		PSTAA_3925 (thiC) View Structure
10 4383045-4383131 (+)SAH4383155-4384562 (+)sahH

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		PSTAA_4085Operon

DOOR ID: 1262621		PSTAA_4085 (sahH),
PSTAA_4086 (metF)		 View Structure
11 4583977-4584065 (-)glycine4582558-4583818 (-)PSTAA_4262

D-amino acid dehydrogenase small subunit		PSTAA_4262Single gene

DOOR ID: 3671116		PSTAA_4262 View Structure