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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
331696-331740
(-)
PreQ1
331218-331692 (-)
NMBB_0356
NADPH-dependent 7-cyano-7-deazaguanine reductase (3) (7-cyano-7-carbaguanine reductase) (NADPH-dependent nitrile oxidoreductase) (PreQ(0) reductase)
NMBB_0356
Operon
DOOR ID:
1052169
NMBB_0355,
NMBB_0356
View Structure
2
544113-544158
(+)
PreQ1
544160-544820 (+)
NMBB_0564
7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
NMBB_0564
Operon
DOOR ID:
1052207
NMBB_0564,
NMBB_0565,
NMBB_0566
View Structure
3
603315-603412
(+)
glycine
603621-604722 (+)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
NMBB_0632
Operon
DOOR ID:
1052219
NMBB_0632
(gcvT)
,
NMBB_0633
(gcvH)
,
NMBB_0634
View Structure
4
2138786-2138885
(-)
TPP
2136793-2138695 (-)
NMBB_2339
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
NMBB_2339
Single gene
DOOR ID:
3647104
NMBB_2339
View Structure
5
2166414-2166517
(+)
TPP
2166582-2167806 (+)
cytX
Hydroxymethylpyrimidine transporter CytX
NMBB_2376
Operon
DOOR ID:
1052551
NMBB_2376
(cytX)
,
NMBB_2377
(thiO)
,
NMBB_2378
View Structure
Genome:
Neisseria meningitidis alpha710
(
NC_017505.1
);
Phylum:
Betaproteobacteria
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