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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
464220-464387
(+)
lysine
464475-466047 (+)
LCGL_0449
Amino acid ABC transporter substrate-binding component
LCGL_0449
Operon
DOOR ID:
1361490
LCGL_0450,
LCGL_0449
View Structure
2
564603-564708
(+)
preQ1-II
565269-566055 (-)
LCGL_0551
Putative hydrolase
LCGL_0551
Single gene
DOOR ID:
3643131
LCGL_0551
View Structure
3
839489-839645
(+)
yybP-ykoY
839776-842452 (+)
LCGL_0819
Cation-transporting ATPase
LCGL_0819
Single gene
DOOR ID:
3643213
LCGL_0819
View Structure
4
943404-943520
(+)
FMN
943620-944205 (+)
LCGL_0917
Riboflavin transporter
LCGL_0917
Single gene
DOOR ID:
3643246
LCGL_0917
View Structure
5
1021196-1021293
(+)
purine
1021451-1022045 (+)
LCGL_1003
Xanthine phosphoribosyltransferase (XPRTase) (2)
LCGL_1003
Operon
DOOR ID:
1361618
LCGL_1003,
LCGL_1004
View Structure
6
1742044-1742142
(+)
TPP
1742198-1742735 (+)
LCGL_1770
LCGL_1770
Operon
DOOR ID:
1361792
LCGL_1770,
LCGL_1771
View Structure
7
1754093-1754191
(-)
THF
1753509-1754049 (-)
LCGL_1781
LCGL_1781
Single gene
DOOR ID:
3643528
LCGL_1781
View Structure
8
1888867-1889043
(+)
lysine
1889118-1890582 (+)
LCGL_1902
Lysine transporter protein
LCGL_1902
Single gene
DOOR ID:
3643576
LCGL_1902
View Structure
Genome:
Lactococcus garvieae Lg2
(
NC_017490.1
);
Phylum:
Firmicutes
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