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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
261815-261887
(+)
fluoride
261965-263234 (+)
enoA
CVCAS_0258
Single gene
DOOR ID:
3642040
CVCAS_0258
(enoA)
View Structure
2
304610-304709
(-)
TPP
304014-304563 (-)
thiA
CVCAS_0301
Operon
DOOR ID:
1049803
CVCAS_0300
(ydbF)
,
CVCAS_0301
(thiA)
View Structure
3
789761-789866
(+)
preQ1-II
790476-791109 (+)
yiaD
CVCAS_0761
Single gene
DOOR ID:
3642245
CVCAS_0761
(yiaD)
View Structure
4
890300-890461
(+)
ykoK
890714-890849 (+)
CVCAS_0846
CVCAS_0846
Operon
DOOR ID:
1049916
CVCAS_0846,
CVCAS_0847
(ftsW)
View Structure
5
1004906-1005022
(+)
FMN
1005204-1006293 (+)
ribG
CVCAS_0959
Operon
DOOR ID:
1049939
CVCAS_0959
(ribG)
,
CVCAS_0960
(ribB)
,
CVCAS_0961
(ribA)
,
CVCAS_0962
(ribH)
View Structure
6
1090066-1090140
(+)
fluoride
1090231-1091443 (+)
eriC
CVCAS_1071
Single gene
DOOR ID:
3642351
CVCAS_1071
(eriC)
View Structure
7
1144364-1144461
(+)
purine
1144572-1145166 (+)
xpt
CVCAS_1117
Operon
DOOR ID:
1049972
CVCAS_1117
(xpt)
,
CVCAS_1118
(pbuX)
View Structure
8
1272407-1272567
(-)
ykoK
1269415-1272148 (-)
mgtA
CVCAS_1223
Single gene
DOOR ID:
3642404
CVCAS_1223
(mgtA)
View Structure
9
1279543-1279645
(-)
TPP
1278709-1279462 (-)
thiM
CVCAS_1231
Operon
DOOR ID:
1049995
CVCAS_1229
(thiE)
,
CVCAS_1230
(thiD1)
,
CVCAS_1231
(thiM)
View Structure
10
1291393-1291529
(-)
FMN
1288690-1290508 (-)
ynaD
CVCAS_1240
Operon
DOOR ID:
1049999
CVCAS_1239
(ynaC)
,
CVCAS_1240
(ynaD)
View Structure
11
1594007-1594182
(-)
lysine
1593012-1593906 (-)
dapA
CVCAS_1528
Single gene
DOOR ID:
3642546
CVCAS_1528
(dapA)
View Structure
12
2264339-2264521
(+)
lysine
2264678-2266127 (+)
lysP2
CVCAS_2221
Single gene
DOOR ID:
3642817
CVCAS_2221
(lysP2)
View Structure
Genome:
Lactococcus lactis subsp. lactis CV56
(
NC_017486.1
);
Phylum:
Firmicutes
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