Genome: Lactobacillus fermentum CECT 5716 (NC_017465.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 180782-180870 (+)TPP181018-181942 (-)LC40_0108

LC40_0108Single gene

DOOR ID: 3633415
LC40_0108 View Structure
2 912206-912340 (-)FMN909196-910390 (-)LC40_0519

GTP cyclohydrolase-2 (5) (GTP cyclohydrolase II)
LC40_0519Single gene

DOOR ID: 3633636
LC40_0519 View Structure
3 949000-949100 (-)TPP948033-948819 (-)LC40_0530

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
LC40_0530Single gene

DOOR ID: 3633644
LC40_0530 View Structure
4 1004087-1004267 (+)lysine1004357-1005677 (+)LC40_0560

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)
LC40_0560Single gene

DOOR ID: 3633672
LC40_0560 View Structure
5 1026147-1026266 (+)FMN1027167-1028070 (+)LC40_0575

LC40_0575Single gene

DOOR ID: 3633680
LC40_0575 View Structure
6 1539672-1539768 (-)SMK_box1532419-1534837 (-)LC40_0860

Leucine--tRNA ligase (Leucyl-tRNA synthetase) (LeuRS)
LC40_0860Single gene

DOOR ID: 3633858
LC40_0860 View Structure
7 1732860-1732952 (-)TPP1728555-1729365 (+)LC40_0965

LC40_0965Single gene

DOOR ID: 3633918
LC40_0965 View Structure
8 1737898-1738068 (-)lysine1736317-1737808 (-)LC40_0972

APC family amino acid-polyamine-organocation transporter
LC40_0972Single gene

DOOR ID: 3633920
LC40_0972 View Structure
9 1927451-1927550 (+)purine1927597-1928929 (+)LC40_1076

Xanthine-uracil transport protein
LC40_1076Single gene

DOOR ID: 3633999
LC40_1076 View Structure
10 1940046-1940135 (+)TPP1940787-1942170 (+)LC40_1084

ABC superfamily ATP binding cassette transporter ABC protein
LC40_1084Single gene

DOOR ID: 3634007
LC40_1084 View Structure