Genome: Halanaerobium praevalens DSM 2228 (NC_017455.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 61164-61344 (+)cobalamin61570-62530 (+)Hprae_0050

Periplasmic binding protein		Hprae_0050Operon

DOOR ID: 1359152		Hprae_0052,
Hprae_0051,
Hprae_0050		 View Structure
2 177304-177404 (+)purine177652-178924 (+)Hprae_0150

Phosphoribosylamine--glycine ligase (3) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)		Hprae_0150Operon

DOOR ID: 1359179		Hprae_0158,
Hprae_0157,
Hprae_0156,
Hprae_0155,
Hprae_0154,
Hprae_0153,
Hprae_0152,
Hprae_0151,
Hprae_0150		 View Structure
3 187732-187818 (+)c-di-GMP-I187986-189987 (+)Hprae_0159

Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor		Hprae_0159operon

DOOR ID: 1359180		Hprae_0160,
Hprae_0159		 View Structure
4 226272-226478 (+)cobalamin226691-229793 (+)Hprae_0194

Anaerobic ribonucleoside-triphosphate reductase		Hprae_0194Operon

DOOR ID: 1359190		Hprae_0196,
Hprae_0195,
Hprae_0194		 View Structure
5 338221-338320 (+)purine338559-339873 (+)Hprae_0295

Xanthine/uracil/vitamin C permease		Hprae_0295Single gene

DOOR ID: 3628690		Hprae_0295 View Structure
6 340802-340898 (+)TPP340925-341255 (+)Hprae_0298

Hprae_0298Operon

DOOR ID: 1359207		Hprae_0302,
Hprae_0301,
Hprae_0300,
Hprae_0299,
Hprae_0298		 View Structure
7 499765-499868 (+)TPP499908-500439 (+)Hprae_0437

Proton-coupled thiamine transporter YuaJ		Hprae_0437Single gene

DOOR ID: 3628723		Hprae_0437 View Structure
8 500451-500552 (+)TPP500660-501947 (+)Hprae_0438

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Hprae_0438Single gene

DOOR ID: 3628724		Hprae_0438 View Structure
9 509999-510105 (+)glycine510247-510625 (+)Hprae_0448

Putative glycine reductase complex component		Hprae_0448Operon

DOOR ID: 1359242		Hprae_0450,
Hprae_0449,
Hprae_0448		 View Structure
10 611770-611857 (+)c-di-GMP-I611912-612299 (+)Hprae_0540

Flagellar basal body rod protein FlgB		Hprae_0540operon

DOOR ID: 1359265		Hprae_0542,
Hprae_0541,
Hprae_0540		 View Structure
11 862791-862969 (-)lysine861142-862684 (-)Hprae_0769

Transporter; NhaC family		Hprae_0769Single gene

DOOR ID: 3628771		Hprae_0769 View Structure
12 900318-900440 (+)FMN900535-901111 (+)Hprae_0805

Riboflavin transporter		Hprae_0805Single gene

DOOR ID: 3628779		Hprae_0805 View Structure
13 937363-937448 (+)c-di-GMP-I937624-939322 (+)Hprae_0839

Type II secretion system protein E		Hprae_0839operon

DOOR ID: 1359318		Hprae_0841,
Hprae_0840,
Hprae_0839		 View Structure
14 1026199-1026377 (+)cobalamin1026510-1028307 (+)Hprae_0929

TonB-dependent receptor		Hprae_0929Operon

DOOR ID: 1359333		Hprae_0933,
Hprae_0932,
Hprae_0931,
Hprae_0930,
Hprae_0929		 View Structure
15 1259022-1259193 (+)cobalamin1259275-1260331 (+)Hprae_1128

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)		Hprae_1128Single gene

DOOR ID: 3628860		Hprae_1128 View Structure
16 1324291-1324375 (-)ZMP-ZTP1321792-1324021 (-)Hprae_1193

Formate acetyltransferase (4)		Hprae_1193Operon

DOOR ID: 1359383		Hprae_1193,
Hprae_1192		 View Structure
17 1336338-1336511 (-)cobalamin1334477-1336055 (-)Hprae_1204

Extracellular solute-binding protein family 5		Hprae_1204Operon

DOOR ID: 1359385		Hprae_1204,
Hprae_1203,
Hprae_1202,
Hprae_1201,
Hprae_1200,
Hprae_1199,
Hprae_1198		 View Structure
18 1352569-1352687 (-)FMN1351239-1352379 (-)Hprae_1216

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Hprae_1216Operon

DOOR ID: 1359387		Hprae_1216,
Hprae_1215,
Hprae_1214,
Hprae_1213		 View Structure
19 1553851-1553981 (-)ydaO-yuaA1552432-1553758 (-)Hprae_1406

Potassium uptake protein; TrkH family (4)		Hprae_1406Operon

DOOR ID: 1359423		Hprae_1406,
Hprae_1405,
Hprae_1404,
Hprae_1403,
Hprae_1402,
Hprae_1401,
Hprae_1400,
Hprae_1399		 View Structure
20 1651153-1651220 (-)fluoride1649876-1651058 (-)Hprae_1491

Sodium/proton antiporter; CPA1 family		Hprae_1491Operon

DOOR ID: 1359440		Hprae_1491,
Hprae_1490		 View Structure
21 1702166-1702361 (-)cobalamin1700458-1702003 (-)Hprae_1537

Cobyric acid synthase		Hprae_1537Operon

DOOR ID: 1359445		Hprae_1537,
Hprae_1536,
Hprae_1535,
Hprae_1534,
Hprae_1533,
Hprae_1532,
Hprae_1531,
Hprae_1530,
Hprae_1529		 View Structure
22 1819919-1820088 (-)glmS1818048-1819881 (-)Hprae_1644

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Hprae_1644Single gene

DOOR ID: 3629006		Hprae_1644 View Structure
23 1891325-1891418 (-)THF1890712-1891255 (-)Hprae_1726

Signal transduction histidine kinase; LytS		Hprae_1726Single gene

DOOR ID: 3629013		Hprae_1726 View Structure
24 1999542-1999649 (-)SAM1998431-1999454 (-)Hprae_1826

Methionine import ATP-binding protein MetN 		Hprae_1826Operon

DOOR ID: 1359504		Hprae_1826,
Hprae_1825,
Hprae_1824		 View Structure