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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
406045-406140
(+)
TPP
406178-407165 (+)
tbpA
Thiamine-binding periplasmic protein
EJP617_03720
Operon
DOOR ID:
1255573
EJP617_03740
(thiQ)
,
EJP617_03730
(thiP)
,
EJP617_03720
(tbpA)
View Structure
2
903136-903325
(+)
lysine
903418-904771 (+)
lysC
Aspartokinase
EJP617_08220
Single gene
DOOR ID:
3622977
EJP617_08220
(lysC)
View Structure
3
1498182-1498282
(-)
TPP
1496156-1498091 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
EJP617_13560
Operon
DOOR ID:
1255767
EJP617_13550
(thiE)
,
EJP617_13560
(thiC)
View Structure
4
1771295-1771443
(+)
FMN
1771550-1772207 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
EJP617_15850
Operon
DOOR ID:
1255812
EJP617_15840,
EJP617_15850
(ribB)
,
EJP617_15860
(ygiD)
View Structure
5
2243880-2243949
(+)
fluoride
2244033-2244411 (+)
crcB
Putative fluoride ion transporter CrcB
EJP617_20250
Single gene
DOOR ID:
3623490
EJP617_20250
(crcB)
View Structure
6
2557424-2557559
(+)
MOCO
2558551-2559067 (+)
moaB
Molybdenum cofactor biosynthesis protein B
EJP617_23380
Operon
DOOR ID:
1255953
EJP617_23370
(moaA)
,
EJP617_23380
(moaB)
,
EJP617_23390
(moaC)
,
EJP617_23400
(moaD)
,
EJP617_23410
(moaE)
,
EJP617_23420
(yaiW)
View Structure
7
3599375-3599476
(-)
TPP
3598548-3599256 (-)
thiM
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
EJP617_33290
Operon
DOOR ID:
1256137
EJP617_33280
(thiD)
,
EJP617_33290
(thiM)
View Structure
Genome:
Erwinia sp. Ejp617
(
NC_017445.1
);
Phylum:
Gammaproteobacteria
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