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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
15946-16044
(+)
SAM
16102-17071 (+)
MS7_0012
MS7_0012
Single gene
DOOR ID:
3605506
MS7_0012
View Structure
2
420535-420637
(+)
purine
420867-421446 (+)
xpt
MS7_0377
Operon
DOOR ID:
1351878
MS7_0377
(xpt)
,
MS7_0378
(pbuX)
,
MS7_0379
(guaB)
,
MS7_0380
(guaA)
View Structure
3
802102-802148
(-)
PreQ1
801263-801932 (-)
queC
MS7_0763
Operon
DOOR ID:
1351958
MS7_0761
(queE)
,
MS7_0762
(queD)
,
MS7_0763
(queC)
View Structure
4
908347-908450
(+)
SAM
908538-909564 (+)
metN2
MS7_0864
Operon
DOOR ID:
1351979
MS7_0864
(metN2)
,
MS7_0865
(metI)
,
MS7_0866
(metQ)
View Structure
5
949943-950033
(+)
preQ1-II
951039-951417 (+)
MS7_0910
MS7_0910
Single gene
DOOR ID:
3605854
MS7_0910
View Structure
6
1027827-1027933
(+)
yybP-ykoY
1028014-1028812 (+)
MS7_0977
MS7_0977
Single gene
DOOR ID:
3605880
MS7_0977
View Structure
7
1089865-1089965
(-)
TPP
1089212-1089788 (-)
MS7_1035
MS7_1035
Operon
DOOR ID:
1352011
MS7_1033,
MS7_1034,
MS7_1035
View Structure
8
1430242-1430417
(+)
lysine
1430498-1431704 (+)
MS7_1349
MS7_1349
Operon
DOOR ID:
1352073
MS7_1349,
MS7_1350
(asd)
,
MS7_1351
(dapA)
,
MS7_1352
(dapB)
,
MS7_1353
(dapD)
View Structure
9
1555291-1555425
(-)
FMN
1554683-1555229 (-)
ribU
MS7_1438
Single gene
DOOR ID:
3606064
MS7_1438
(ribU)
View Structure
10
1651880-1651977
(-)
glycine
1650713-1651805 (-)
gcvT
MS7_1554
Operon
DOOR ID:
1352118
MS7_1552,
MS7_1553,
MS7_1554
(gcvT)
View Structure
11
1782170-1782345
(-)
lysine
1780531-1782025 (-)
MS7_1689
MS7_1689
Single gene
DOOR ID:
3606116
MS7_1689
View Structure
12
1894968-1895103
(-)
FMN
1893797-1894841 (-)
ribD
MS7_1774
Operon
DOOR ID:
1352164
MS7_1771
(ribH)
,
MS7_1772
(ribA)
,
MS7_1773
(ribE)
,
MS7_1774
(ribD)
View Structure
13
1909427-1909538
(-)
SAM
1908127-1909321 (-)
metK
MS7_1789
Single gene
DOOR ID:
3606173
MS7_1789
(metK)
View Structure
14
2198116-2198218
(-)
TPP
2197346-2198036 (-)
tenA
MS7_2110
Operon
DOOR ID:
1352226
MS7_2107
(thiE)
,
MS7_2108
(thiM)
,
MS7_2109
(thiD)
,
MS7_2110
(tenA)
View Structure
15
2255647-2255863
(-)
glmS
2253639-2255445 (-)
glmS
MS7_2170
Single gene
DOOR ID:
3606303
MS7_2170
(glmS)
View Structure
16
2427369-2427464
(-)
SAM
2425978-2427292 (-)
MS7_2343
MS7_2343
Single gene
DOOR ID:
3606374
MS7_2343
View Structure
Genome:
Staphylococcus aureus subsp. aureus 11819-97
(
NC_017351.1
);
Phylum:
Firmicutes
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";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"420535-420637";i:6;s:1:"+";i:7;s:6:"purine";i:8;s:0:"";i:9;s:13:"420867-421446";i:10;s:1:"+";i:11;s:3:"xpt";i:12;s:0:"";i:13;s:8:"MS7_0377";i:14;s:6:"Operon";i:15;s:7:"1351878";i:16;s:58:"MS7_0377(xpt);MS7_0378(pbuX);MS7_0379(guaB);MS7_0380(guaA)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"802102-802148";i:6;s:1:"-";i:7;s:5:"PreQ1";i:8;s:0:"";i:9;s:13:"801263-801932";i:10;s:1:"-";i:11;s:4:"queC";i:12;s:0:"";i:13;s:8:"MS7_0763";i:14;s:6:"Operon";i:15;s:7:"1351958";i:16;s:44:"MS7_0761(queE);MS7_0762(queD);MS7_0763(queC)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"908347-908450";i:6;s:1:"+";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:13:"908538-909564";i:10;s:1:"+";i:11;s:5:"metN2";i:12;s:0:"";i:13;s:8:"MS7_0864";i:14;s:6:"Operon";i:15;s:7:"1351979";i:16;s:45:"MS7_0864(metN2);MS7_0865(metI);MS7_0866(metQ)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"949943-950033";i:6;s:1:"+";i:7;s:8:"preQ1-II";i:8;s:0:"";i:9;s:13:"951039-951417";i:10;s:1:"+";i:11;s:8:"MS7_0910";i:12;s:0:"";i:13;s:8:"MS7_0910";i:14;s:11:"Single gene";i:15;s:7:"3605854";i:16;s:8:"MS7_0910";i:17;s:0:"";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1027827-1027933";i:6;s:1:"+";i:7;s:9:"yybP-ykoY";i:8;s:0:"";i:9;s:15:"1028014-1028812";i:10;s:1:"+";i:11;s:8:"MS7_0977";i:12;s:0:"";i:13;s:8:"MS7_0977";i:14;s:11:"Single gene";i:15;s:7:"3605880";i:16;s:8:"MS7_0977";i:17;s:0:"";i:18;s:15:"View Structure ";}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1089865-1089965";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"1089212-1089788";i:10;s:1:"-";i:11;s:8:"MS7_1035";i:12;s:0:"";i:13;s:8:"MS7_1035";i:14;s:6:"Operon";i:15;s:7:"1352011";i:16;s:26:"MS7_1033;MS7_1034;MS7_1035";i:17;s:0:"";i:18;s:15:"View Structure ";}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1430242-1430417";i:6;s:1:"+";i:7;s:6:"lysine";i:8;s:0:"";i:9;s:15:"1430498-1431704";i:10;s:1:"+";i:11;s:8:"MS7_1349";i:12;s:0:"";i:13;s:8:"MS7_1349";i:14;s:6:"Operon";i:15;s:7:"1352073";i:16;s:67:"MS7_1349;MS7_1350(asd);MS7_1351(dapA);MS7_1352(dapB);MS7_1353(dapD)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1555291-1555425";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1554683-1555229";i:10;s:1:"-";i:11;s:4:"ribU";i:12;s:0:"";i:13;s:8:"MS7_1438";i:14;s:11:"Single gene";i:15;s:7:"3606064";i:16;s:14:"MS7_1438(ribU)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1651880-1651977";i:6;s:1:"-";i:7;s:7:"glycine";i:8;s:0:"";i:9;s:15:"1650713-1651805";i:10;s:1:"-";i:11;s:4:"gcvT";i:12;s:0:"";i:13;s:8:"MS7_1554";i:14;s:6:"Operon";i:15;s:7:"1352118";i:16;s:32:"MS7_1552;MS7_1553;MS7_1554(gcvT)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:11;a:19:{i:0;i:11;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1782170-1782345";i:6;s:1:"-";i:7;s:6:"lysine";i:8;s:0:"";i:9;s:15:"1780531-1782025";i:10;s:1:"-";i:11;s:8:"MS7_1689";i:12;s:0:"";i:13;s:8:"MS7_1689";i:14;s:11:"Single gene";i:15;s:7:"3606116";i:16;s:8:"MS7_1689";i:17;s:0:"";i:18;s:15:"View Structure ";}i:12;a:19:{i:0;i:12;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1894968-1895103";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1893797-1894841";i:10;s:1:"-";i:11;s:4:"ribD";i:12;s:0:"";i:13;s:8:"MS7_1774";i:14;s:6:"Operon";i:15;s:7:"1352164";i:16;s:59:"MS7_1771(ribH);MS7_1772(ribA);MS7_1773(ribE);MS7_1774(ribD)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:13;a:19:{i:0;i:13;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"1909427-1909538";i:6;s:1:"-";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:15:"1908127-1909321";i:10;s:1:"-";i:11;s:4:"metK";i:12;s:0:"";i:13;s:8:"MS7_1789";i:14;s:11:"Single gene";i:15;s:7:"3606173";i:16;s:14:"MS7_1789(metK)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:14;a:19:{i:0;i:14;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"2198116-2198218";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"2197346-2198036";i:10;s:1:"-";i:11;s:4:"tenA";i:12;s:0:"";i:13;s:8:"MS7_2110";i:14;s:6:"Operon";i:15;s:7:"1352226";i:16;s:59:"MS7_2107(thiE);MS7_2108(thiM);MS7_2109(thiD);MS7_2110(tenA)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:15;a:19:{i:0;i:15;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"2255647-2255863";i:6;s:1:"-";i:7;s:4:"glmS";i:8;s:0:"";i:9;s:15:"2253639-2255445";i:10;s:1:"-";i:11;s:4:"glmS";i:12;s:0:"";i:13;s:8:"MS7_2170";i:14;s:11:"Single gene";i:15;s:7:"3606303";i:16;s:14:"MS7_2170(glmS)";i:17;s:0:"";i:18;s:15:"View Structure ";}i:16;a:19:{i:0;i:16;i:1;s:11:"NC_017351.1";i:2;s:45:"Staphylococcus aureus subsp. aureus 11819-97 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"2427369-2427464";i:6;s:1:"-";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:15:"2425978-2427292";i:10;s:1:"-";i:11;s:8:"MS7_2343";i:12;s:0:"";i:13;s:8:"MS7_2343";i:14;s:11:"Single gene";i:15;s:7:"3606374";i:16;s:8:"MS7_2343";i:17;s:0:"";i:18;s:15:"View Structure ";}}