Genome: Shigella flexneri 2002017 (NC_017328.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 72838-72937 (-)TPP71823-72819 (-)tbpA

Putative ABC-type thiamine transport system; periplasmic component		SFxv_0065Operon

DOOR ID: 1254642		SFxv_0067 (sgrR),
SFxv_0066,
SFxv_0065 (tbpA),
SFxv_0064 (thiP),
SFxv_0063 (thiQ)		 View Structure
2 772699-772843 (+)MOCO773841-774354 (+)moaB

Molybdenum cofactor biosynthesis protein B		SFxv_0798Operon

DOOR ID: 1254789		SFxv_0801 (moaE),
SFxv_0800 (moaD),
SFxv_0799 (moaC),
SFxv_0798 (moaB),
SFxv_0797 (moaA)		 View Structure
3 1504690-1504791 (-)yybP-ykoY1503185-1503995 (+)rrmA

Ribosomal RNA large subunit methyltransferase A		SFxv_1591Single gene

DOOR ID: 3592949		SFxv_1591 (rrmA) View Structure
4 2231749-2231845 (-)TPP2230925-2231714 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		SFxv_2394Operon

DOOR ID: 1255059		SFxv_2391 (yegW),
SFxv_2392 (yegX),
SFxv_2393 (thiD),
SFxv_2394 (thiM)		 View Structure
5 3215302-3215450 (-)FMN3214544-3215198 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		SFxv_3382Single gene

DOOR ID: 3593663		SFxv_3382 (ribB) View Structure
6 4223056-4223246 (+)cobalamin4223265-4225155 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		SFxv_4411Operon

DOOR ID: 1255424		SFxv_4411 (btuB),
SFxv_4412 (murI)		 View Structure
7 4254672-4254772 (-)TPP4252695-4254591 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		SFxv_4433Operon

DOOR ID: 1255429		SFxv_4429 (thiH),
SFxv_4430 (thiG),
SFxv_4431 (thiF),
SFxv_4432 (thiE),
SFxv_4433 (thiC)		 View Structure
8 4397313-4397509 (+)lysine4397600-4398950 (+)lysC

Aspartokinase 		SFxv_4558Single gene

DOOR ID: 3594114		SFxv_4558 (lysC) View Structure
9 4463297-4463412 (-)Mg sensor4460506-4463203 (-)mgtA

Mg2+ transport ATPase; P-type 1		SFxv_4631Single gene

DOOR ID: 3594145		SFxv_4631 (mgtA) View Structure
10 4524908-4524954 (+)mini-ykkC4525285-4525819 (-)blc

SFxv_4696Operon

DOOR ID: 1255476		SFxv_4696 (blc),
SFxv_4697 (ampC),
SFxv_4698 (frdD),
SFxv_4699 (frdC),
SFxv_4700 (frdB),
SFxv_4701 (frdA)		 View Structure