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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
189585-189759
(-)
lysine
187806-189447 (-)
OG1RF_10191
OG1RF_10191
Operon
DOOR ID:
1028033
OG1RF_10190,
OG1RF_10191
View Structure
2
542819-542914
(+)
SMK_box
544265-545732 (+)
OG1RF_10518
OG1RF_10518
Operon
DOOR ID:
1028107
OG1RF_10518,
OG1RF_10519
View Structure
3
702484-702651
(+)
THF
702681-703230 (+)
OG1RF_10667
OG1RF_10667
Single gene
DOOR ID:
3586084
OG1RF_10667
View Structure
4
874318-874485
(-)
ykoK
873992-874253 (-)
coaE2
OG1RF_10834
Single gene
DOOR ID:
3586130
OG1RF_10834
(coaE2)
View Structure
5
877233-877401
(-)
ykoK
875415-877188 (-)
OG1RF_10836
OG1RF_10836
Operon
DOOR ID:
1028176
OG1RF_10835,
OG1RF_10836
View Structure
6
1113791-1113961
(+)
ykoK
1114074-1116735 (+)
mgtA
OG1RF_11074
Single gene
DOOR ID:
3586197
OG1RF_11074
(mgtA)
View Structure
7
1187371-1187538
(+)
ykoK
1187734-1190374 (+)
mgtA2
OG1RF_11140
Single gene
DOOR ID:
3586216
OG1RF_11140
(mgtA2)
View Structure
8
1317942-1318061
(+)
FMN
1318131-1318797 (+)
OG1RF_11260
OG1RF_11260
Single gene
DOOR ID:
3586258
OG1RF_11260
View Structure
9
1413726-1413857
(-)
cobalamin
1412270-1413401 (-)
pduQ
OG1RF_11349
Single gene
DOOR ID:
3586293
OG1RF_11349
(pduQ)
View Structure
10
1417961-1418132
(-)
cobalamin
1416814-1417843 (-)
OG1RF_11354
OG1RF_11354
Operon
DOOR ID:
1028282
OG1RF_11350,
OG1RF_11351
(eutP)
,
OG1RF_11352,
OG1RF_11353,
OG1RF_11354
View Structure
11
1766014-1766161
(-)
glmS
1764127-1765936 (-)
glmS
OG1RF_11692
Single gene
DOOR ID:
3586396
OG1RF_11692
(glmS)
View Structure
12
1896953-1897050
(-)
purine
1896216-1896798 (-)
xpt
OG1RF_11798
Operon
DOOR ID:
1028382
OG1RF_11797
(pbuX)
,
OG1RF_11798
(xpt)
View Structure
13
1998745-1998814
(-)
fluoride
1997402-1998668 (-)
OG1RF_11895
OG1RF_11895
Single gene
DOOR ID:
3586456
OG1RF_11895
View Structure
14
2078434-2078478
(+)
PreQ1
2078555-2079536 (+)
rihB
OG1RF_11966
Operon
DOOR ID:
1028422
OG1RF_11966
(rihB)
,
OG1RF_11967
View Structure
15
2146510-2146555
(-)
PreQ1
2145990-2146497 (-)
OG1RF_12031
OG1RF_12031
Single gene
DOOR ID:
3586489
OG1RF_12031
View Structure
16
2252020-2252110
(-)
TPP
2251351-2251915 (-)
OG1RF_12130
OG1RF_12130
Operon
DOOR ID:
1028469
OG1RF_12127
(tenA)
,
OG1RF_12128,
OG1RF_12129,
OG1RF_12130
View Structure
17
2259325-2259413
(-)
TPP
2258695-2259226 (-)
thiW
OG1RF_12138
Operon
DOOR ID:
1028470
OG1RF_12135
(thiD2)
,
OG1RF_12136
(thiE)
,
OG1RF_12137
(thiM)
,
OG1RF_12138
(thiW)
View Structure
18
2638773-2638939
(+)
ykoK
2639030-2640647 (+)
OG1RF_12500
OG1RF_12500
Single gene
DOOR ID:
3586648
OG1RF_12500
View Structure
Genome:
Enterococcus faecalis OG1RF
(
NC_017316.1
);
Phylum:
Firmicutes
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";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:15:"2638773-2638939";i:6;s:1:"+";i:7;s:4:"ykoK";i:8;s:0:"";i:9;s:15:"2639030-2640647";i:10;s:1:"+";i:11;s:11:"OG1RF_12500";i:12;s:0:"";i:13;s:11:"OG1RF_12500";i:14;s:11:"Single gene";i:15;s:7:"3586648";i:16;s:11:"OG1RF_12500";i:17;s:0:"";i:18;s:15:"View Structure ";}}