Genome: Desulfovibrio vulgaris RCH1 (NC_017310.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 15645-15877 (-)cobalamin13190-15548 (-)Deval_0013

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Deval_0013Single gene

DOOR ID: 3583590
Deval_0013 View Structure
2 726195-726376 (-)cobalamin725165-726059 (-)Deval_0595

Sirohydrochlorin cobaltochelatase
Deval_0595Operon

DOOR ID: 1254109
Deval_0595,
Deval_0594,
Deval_0593,
Deval_0592,
Deval_0591
View Structure
3 812636-812731 (-)glycine811087-812629 (-)Deval_0666

Amino acid carrier protein
Deval_0666Single gene

DOOR ID: 3583838
Deval_0666 View Structure
4 1267716-1267837 (-)SAM1267277-1267544 (-)Deval_1082

Deval_1082Single gene

DOOR ID: 3583966
Deval_1082 View Structure
5 1742441-1742588 (+)FMN1742682-1743327 (+)Deval_1524

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Deval_1524Single gene

DOOR ID: 3584117
Deval_1524 View Structure
6 2188125-2188225 (-)TPP2187768-2187969 (-)Deval_1947

Thiamine biosynthesis protein ThiS
Deval_1947Operon

DOOR ID: 1254390
Deval_1944,
Deval_1945,
Deval_1946,
Deval_1947
View Structure
7 2188291-2188391 (-)TPP2187768-2187969 (-)Deval_1947

Thiamine biosynthesis protein ThiS
Deval_1947Operon

DOOR ID: 1254390
Deval_1944,
Deval_1945,
Deval_1946,
Deval_1947
View Structure
8 3056103-3056279 (-)cobalamin3053880-3055950 (-)Deval_2722

Anaerobic ribonucleoside-triphosphate reductase
Deval_2722Single gene

DOOR ID: 3584508
Deval_2722 View Structure