RiboswitchDB

Genome: Synechocystis sp. PCC 6803 strain: GT-S (NC_017277.1); Phylum: Cyanobacteria/Melainabacteria group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

458891-458952 (-)

glutamine

458407-458857 (-)

sll1515

Single gene

DOOR ID: 3564833

SYNGTS_0418 (sll1515)

2

801280-801401 (-)

ykkC-yxkD

800033-801206 (-)

speB

Operon

DOOR ID: 1021048

SYNGTS_0720 (sll1080),
SYNGTS_0721 (hypB),
SYNGTS_0722 (sll1078),
SYNGTS_0723 (speB)

3

1260044-1260185 (+)

cobalamin

1260865-1262077 (+)

ispG

Operon

DOOR ID: 1021140

SYNGTS_1140 (hupE),
SYNGTS_1141 (ispG)

4

2997895-2997990 (+)

TPP

2997997-2999377 (+)

thiC

Single gene

DOOR ID: 3565538

SYNGTS_2694 (thiC)

5

3420207-3420356 (+)

ydaO-yuaA

3420664-3422014 (+)

slr0753

Single gene

DOOR ID: 3565643

SYNGTS_3045 (slr0753)

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";}}