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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
228051-228157
(-)
TPP
227088-227964 (-)
thiD
BM28_A0228
Operon
DOOR ID:
1343444
BM28_A0220,
BM28_A0221,
BM28_A0222,
BM28_A0223,
BM28_A0224
(thiE)
,
BM28_A0225,
BM28_A0226
(thiS)
,
BM28_A0227,
BM28_A0228
(thiD)
View Structure
2
339021-339100
(-)
sam-alpha
337733-338930 (-)
BM28_A0336
BM28_A0336
Single gene
DOOR ID:
3540593
BM28_A0336
View Structure
3
1291268-1291505
(-)
cobalamin
1291028-1291217 (-)
cbtB
BM28_A1323
Operon
DOOR ID:
1343661
BM28_A1317,
BM28_A1318
(cobO)
,
BM28_A1319
(cobN)
,
BM28_A1320
(cobW)
,
BM28_A1321
(cobU)
,
BM28_A1322
(cbtA)
,
BM28_A1323
(cbtB)
View Structure
4
1329656-1329884
(-)
cobalamin
1326783-1327623 (-)
BM28_A1360
BM28_A1360
Operon
DOOR ID:
1343669
BM28_A1358
(cbrD)
,
BM28_A1359,
BM28_A1360,
BM28_A1361
View Structure
5
1701379-1701425
(+)
glutamine
1701588-1703025 (-)
BM28_A1748
BM28_A1748
Operon
DOOR ID:
1343746
BM28_A1748,
BM28_A1749
View Structure
6
1708201-1708371
(+)
TPP
1708412-1709417 (+)
tbpA
BM28_A1756
Operon
DOOR ID:
1343748
BM28_A1756
(tbpA)
,
BM28_A1757
(thiP)
,
BM28_A1758
(thiQ)
View Structure
Genome:
Brucella melitensis M28 chromosome I
(
NC_017244.1
);
Phylum:
Alphaproteobacteria
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