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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
125300-125400
(+)
TPP
126208-127903 (+)
BIF_02010
Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
BIF_02010
Operon
DOOR ID:
1011939
BIF_02010,
BIF_01863
View Structure
2
1442698-1442797
(+)
TPP
1443650-1443956 (-)
BIF_01751
Hypothetical RNA binding protein
BIF_01751
Single gene
DOOR ID:
3532566
BIF_01751
View Structure
3
1448282-1448425
(-)
FMN
1445168-1445315 (+)
BIF_02067
BIF_02067
Single gene
DOOR ID:
3532568
BIF_02067
View Structure
4
1461879-1461986
(-)
TPP
1460001-1461114 (-)
BIF_00879
Iron-sulfur cluster carrier protein
BIF_00879
Single gene
DOOR ID:
3532570
BIF_00879
View Structure
5
1473802-1473911
(+)
TPP
1473930-1474569 (+)
BIF_00821
Hydroxymethylpyrimidine transport system permease protein
BIF_00821
Single gene
DOOR ID:
3532580
BIF_00821
View Structure
6
1797728-1797865
(+)
TPP
1798673-1799819 (+)
BIF_02068
Alkanesulfonates-binding protein
BIF_02068
Operon
DOOR ID:
1012218
BIF_00922,
BIF_02068
View Structure
Genome:
Bifidobacterium animalis subsp. lactis BB-12
(
NC_017214.1
);
Phylum:
Actinobacteria
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