Genome: Amycolatopsis mediterranei S699 (NC_017186.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1944270-1944382 (+)glycine1944486-1947276 (+)RAM_09200

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		RAM_09200Operon

DOOR ID: 1243688		RAM_09200,
RAM_09205 (gcvT),
RAM_09210,
RAM_09215,
RAM_09220,
RAM_09225		 View Structure
2 3173735-3173849 (+)SAM-IV3173888-3175232 (+)RAM_15090

Cysteine desulfurase		RAM_15090Single gene

DOOR ID: 3516240		RAM_15090 View Structure
3 5512732-5512830 (-)glycine5509534-5512420 (-)RAM_25370

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		RAM_25370Operon

DOOR ID: 1244361		RAM_25360,
RAM_25365,
RAM_25370		 View Structure
4 5739604-5739682 (-)SAH5735959-5739589 (-)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		RAM_26370Single gene

DOOR ID: 3517070		RAM_26370 (metH) View Structure
5 5839036-5839114 (+)SAH5839198-5840659 (+)RAM_26810

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		RAM_26810Operon

DOOR ID: 1244427		RAM_26810,
RAM_26815		 View Structure
6 7363345-7363483 (-)ykkC-yxkD7362443-7363340 (-)RAM_34290

RAM_34290Operon

DOOR ID: 1244755		RAM_34285,
RAM_34290		 View Structure
7 7365260-7365393 (+)SAM7365406-7366672 (+)RAM_34305

Threonine synthase 		RAM_34305Single gene

DOOR ID: 3517647		RAM_34305 View Structure
8 7810106-7810219 (+)cobalamin7810268-7813832 (+)cobN

Cobaltochelatase subunit CobN 		RAM_36270Single gene

DOOR ID: 3517804		RAM_36270 (cobN) View Structure
9 8849040-8849147 (-)TPP8847969-8849004 (-)RAM_41315

Thiamine ABC transporter periplasmic protein		RAM_41315Operon

DOOR ID: 1245047		RAM_41305,
RAM_41310,
RAM_41315		 View Structure
10 9072581-9072671 (-)SAM9071359-9072373 (-)RAM_42355

Methionine import ATP-binding protein MetN 		RAM_42355Single gene

DOOR ID: 3518267		RAM_42355 View Structure
11 9409789-9409910 (+)TPP9409930-9411541 (+)RAM_43995

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		RAM_43995Operon

DOOR ID: 1245163		RAM_43995,
RAM_44000		 View Structure
12 9416984-9417089 (-)TPP9415716-9415917 (-)RAM_44025

Thiamine biosynthesis protein ThiS		RAM_44025Operon

DOOR ID: 1245164		RAM_44020,
RAM_44025,
RAM_44030		 View Structure
13 9513771-9513860 (+)SAH9515645-9516173 (+)RAM_44500

RAM_44500Operon

DOOR ID: 1245183		RAM_44490,
RAM_44495,
RAM_44500,
RAM_44505,
RAM_44510		 View Structure