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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
387319-387508
(-)
FMN
386423-387077 (-)
ribB
A1122_01780
Single gene
DOOR ID:
3509981
A1122_01780
(ribB)
View Structure
2
536657-536794
(+)
TPP
536868-537861 (+)
tbpA
A1122_02460
Operon
DOOR ID:
1241827
A1122_02470
(thiQ)
,
A1122_02465
(thiP)
,
A1122_02460
(tbpA)
View Structure
3
739421-739467
(-)
mini-ykkC
738409-738868 (+)
A1122_03355
A1122_03355
Operon
DOOR ID:
1241861
A1122_03355,
A1122_03350,
A1122_03345,
A1122_03340,
A1122_03335,
A1122_03330
View Structure
4
1366566-1366828
(+)
cobalamin
1366896-1368792 (+)
btuB
A1122_06265
Operon
DOOR ID:
1241968
A1122_06265
(btuB)
,
A1122_06270
View Structure
5
1571384-1571509
(-)
TPP
1569204-1571250 (-)
A1122_07165
A1122_07165
Operon
DOOR ID:
1242003
A1122_07140
(thiH)
,
A1122_07145
(thiG)
,
A1122_07150,
A1122_07155,
A1122_07160,
A1122_07165
View Structure
6
2541533-2541637
(-)
TPP
2540608-2541409 (-)
A1122_11590
A1122_11590
Single gene
DOOR ID:
3510794
A1122_11590
View Structure
7
2844203-2844266
(+)
fluoride
2844366-2844750 (+)
A1122_13125
A1122_13125
Single gene
DOOR ID:
3510926
A1122_13125
View Structure
8
3660930-3661129
(+)
yybP-ykoY
3661139-3661709 (+)
A1122_17100
A1122_17100
Single gene
DOOR ID:
3511296
A1122_17100
View Structure
9
4228736-4228882
(+)
MOCO
4229949-4230429 (+)
moaC
A1122_19680
Operon
DOOR ID:
1242502
A1122_19675
(moaA)
,
A1122_19680
(moaC)
,
A1122_19685
(moaD)
,
A1122_19690
(moaE)
View Structure
Genome:
Yersinia pestis A1122
(
NC_017168.1
);
Phylum:
Gammaproteobacteria
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