Genome: Yersinia pestis D182038 (NC_017160.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 364741-364787 (+)mini-ykkC364806-365121 (+)sugE

YPD8_0310Single gene

DOOR ID: 3505700
YPD8_0310 (sugE) View Structure
2 564879-565016 (-)TPP563811-564858 (-)YPD8_0460


DOOR ID: 1005187
YPD8_0459 (cysU),
View Structure
3 713555-713744 (+)FMN713985-714639 (+)ribB

YPD8_0570Single gene

DOOR ID: 3505812
YPD8_0570 (ribB) View Structure
4 1453554-1453700 (-)MOCO1452006-1452486 (-)moaC


DOOR ID: 1005308
YPD8_1117 (moaC),
YPD8_1118 (moaA)
View Structure
5 2538990-2539189 (+)yybP-ykoY2539199-2539769 (+)YPD8_2002

YPD8_2002Single gene

DOOR ID: 3506487
YPD8_2002 View Structure
6 2899414-2899477 (-)fluoride2898929-2899313 (-)ccrB

YPD8_2270Single gene

DOOR ID: 3506627
YPD8_2270 (ccrB) View Structure
7 3109003-3109107 (+)TPP3109230-3110031 (+)thiD

YPD8_2443Single gene

DOOR ID: 3506700
YPD8_2443 (thiD) View Structure
8 4163224-4163349 (+)TPP4163482-4165528 (+)thiC


DOOR ID: 1005728
YPD8_3291 (thiC),
YPD8_3293 (thiF)
View Structure
9 4365951-4366213 (-)cobalamin4363986-4365882 (-)YPD8_3446

YPD8_3446Single gene

DOOR ID: 3507156
YPD8_3446 View Structure