Genome: Acetobacter pasteurianus IFO 3283-03 (NC_017100.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 440659-440891 (+)cobalamin441025-443185 (+)APA03_04230

APA03_04230Operon

DOOR ID: 999906
APA03_04230,
APA03_04240,
APA03_04250 (fecCD),
APA03_04260
View Structure
2 1403383-1403502 (+)TPP1403533-1404364 (+)APA03_13250

APA03_13250Single gene

DOOR ID: 3494510
APA03_13250 View Structure
3 1587794-1587976 (-)yybP-ykoY1587198-1587789 (-)APA03_14770

APA03_14770Single gene

DOOR ID: 3494571
APA03_14770 View Structure
4 1996262-1996341 (+)sam-alpha1996451-1997660 (+)APA03_18390

APA03_18390Single gene

DOOR ID: 3494725
APA03_18390 View Structure
5 2019177-2019323 (-)FMN2018024-2019077 (-)ribD

APA03_18580Operon

DOOR ID: 1000195
APA03_18530,
APA03_18540,
APA03_18550,
APA03_18560,
APA03_18570,
APA03_18580 (ribD)
View Structure
6 2432280-2432518 (+)cobalamin2432559-2433024 (+)APA03_22360

APA03_22360Single gene

DOOR ID: 3494859
APA03_22360 View Structure
7 2454381-2454618 (-)cobalamin2453773-2454202 (-)APA03_22540

APA03_22540Operon

DOOR ID: 1000273
APA03_22510 (cbiA),
APA03_22520 (cobN),
APA03_22530 (cobW),
APA03_22540
View Structure
8 2625473-2625558 (-)glycine2624176-2625313 (-)APA03_24240

APA03_24240Operon

DOOR ID: 1000306
APA03_24220,
APA03_24230,
APA03_24240
View Structure
9 2734011-2734164 (+)TPP2734247-2736125 (+)thiC

APA03_25230Single gene

DOOR ID: 3494958
APA03_25230 (thiC) View Structure
10 2743333-2743554 (-)cobalamin2741621-2743214 (-)oprB

APA03_25310Single gene

DOOR ID: 3494961
APA03_25310 (oprB) View Structure