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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
509130-509302
(-)
ykoK
508119-508797 (-)
Spiaf_0422
Putative membrane protein
Spiaf_0422
Single gene
DOOR ID:
3493297
Spiaf_0422
View Structure
2
867567-867745
(+)
cobalamin
867861-868446 (+)
Spiaf_0748
Spiaf_0748
Operon
DOOR ID:
1339710
Spiaf_0751,
Spiaf_0750,
Spiaf_0749,
Spiaf_0748
View Structure
3
1516301-1516440
(-)
FMN
1515007-1516174 (-)
Spiaf_1325
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Spiaf_1325
Operon
DOOR ID:
1339834
Spiaf_1325,
Spiaf_1324,
Spiaf_1323,
Spiaf_1322
View Structure
4
2598960-2599075
(-)
TPP
2598243-2598873 (-)
Spiaf_2296
YKOF-like protein
Spiaf_2296
Operon
DOOR ID:
1340033
Spiaf_2293,
Spiaf_2294,
Spiaf_2295,
Spiaf_2296
View Structure
5
2606652-2606833
(-)
cobalamin
2604098-2606552 (-)
Spiaf_2303
Anaerobic ribonucleoside-triphosphate reductase
Spiaf_2303
Operon
DOOR ID:
1340034
Spiaf_2302,
Spiaf_2303
View Structure
6
2980583-2980697
(-)
TPP
2979472-2980519 (-)
Spiaf_2611
ABC transporter periplasmic binding protein; thiB subfamily
Spiaf_2611
Operon
DOOR ID:
1340101
Spiaf_2609,
Spiaf_2610,
Spiaf_2611
View Structure
Genome:
Spirochaeta africana DSM 8902
(
NC_017098.1
);
Phylum:
Spirochaetia
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