Genome: Selenomonas ruminantium subsp. lactilytica TAM6421 (NC_017068.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 554685-554805 (+)MOCO554871-555903 (+)SELR_04850

SELR_04850Operon

DOOR ID: 1338546		SELR_04880 (mog),
SELR_04870 (moaA),
SELR_04860 (moeA),
SELR_04850		 View Structure
2 679885-679999 (+)TPP680060-680255 (+)thiS

Putative thiamine biosynthesis protein ThiS		SELR_06100Operon

DOOR ID: 1338576		SELR_06150,
SELR_06140,
SELR_06130 (thiE),
SELR_06120 (thiH),
SELR_06110 (thiG),
SELR_06100 (thiS)		 View Structure
3 746752-746914 (+)glmS746949-748779 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		SELR_06800Single gene

DOOR ID: 3482151		SELR_06800 (glmS) View Structure
4 824158-824301 (+)MOCO825101-825773 (+)modB

Putative molybdenum ABC transporter permease protein		SELR_07740Operon

DOOR ID: 1338608		SELR_07750 (modC),
SELR_07740 (modB),
SELR_07730 (modA)		 View Structure
5 830433-830617 (+)cobalamin830803-832981 (+)mutA

Putative methylmalonyl-CoA mutase small subunit 		SELR_07780Operon

DOOR ID: 1338610		SELR_07810 (msrA),
SELR_07800 (argK),
SELR_07790 (mutB),
SELR_07780 (mutA)		 View Structure
6 839163-839348 (+)cobalamin839481-840420 (+)SELR_07850

Putative ABC transporter permease protein		SELR_07850Operon

DOOR ID: 1338612		SELR_07890,
SELR_07880,
SELR_07870,
SELR_07860,
SELR_07850		 View Structure
7 999386-999565 (+)cobalamin999718-1000687 (+)SELR_09290

Putative ABC transporter periplasmic substrate-binding protein		SELR_09290Operon

DOOR ID: 1338645		SELR_09290,
SELR_09300,
SELR_09310,
SELR_09320,
SELR_09330 (tolQ),
SELR_09340 (tolR),
SELR_09350 (tonB)		 View Structure
8 1068715-1068839 (+)FMN1068953-1070048 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		SELR_09850Operon

DOOR ID: 1338658		SELR_09850 (ribD),
SELR_09860 (ribE),
SELR_09870 (ribBA),
SELR_09880 (ribH),
SELR_09890,
SELR_09900 (hslO)		 View Structure
9 1297649-1297829 (+)cobalamin1298152-1299580 (+)SELR_11970

Putative divalent ion symporter		SELR_11970Single gene

DOOR ID: 3482251		SELR_11970 View Structure
10 1526596-1526699 (+)TPP1526754-1528068 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		SELR_14660Single gene

DOOR ID: 3482314		SELR_14660 (thiC) View Structure
11 1552983-1553087 (+)SAM1553192-1554383 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		SELR_14880Single gene

DOOR ID: 3482320		SELR_14880 (metK) View Structure
12 1777231-1777426 (-)cobalamin1776103-1777096 (-)cbiK

Putative sirohydrochlorin cobaltochelatase 		SELR_17050Single gene

DOOR ID: 3482378		SELR_17050 (cbiK) View Structure
13 2292677-2292832 (-)ydaO-yuaA2292007-2292670 (-)SELR_22030

SELR_22030Single gene

DOOR ID: 3482502		SELR_22030 View Structure
14 2409209-2409291 (-)ZMP-ZTP2407913-2409131 (-)SELR_23010

Putative major facilitator superfamily transporter		SELR_23010Single gene

DOOR ID: 3482534		SELR_23010 View Structure
15 2494615-2494717 (-)purine2493210-2494542 (-)SELR_23780

Putative xanthine/uracil/vitamin C permease		SELR_23780Single gene

DOOR ID: 3482551		SELR_23780 View Structure
16 2992065-2992141 (+)ZMP-ZTP2992185-2993355 (+)SELR_28150

Putative phosphoribosylaminoimidazolecarboxamide formyltransferase 		SELR_28150Single gene

DOOR ID: 3482662		SELR_28150 View Structure