RiboswitchDB

Genome: Riemerella anatipestifer ATCC 11845 = DSM 15868 (NC_017045.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

83501-83691 (+)

cobalamin

85560-86607 (+)

RA0C_0099

Operon

DOOR ID: 1337643

RA0C_0099,
RA0C_0098

2

687139-687228 (-)

TPP

686356-687079 (-)

RA0C_0712

Methyltransferase type 11

Operon

DOOR ID: 1337773

RA0C_0712,
RA0C_0711,
RA0C_0710,
RA0C_0709

3

1845446-1845536 (-)

TPP

1843258-1845376 (-)

RA0C_1832

Tonb-dependent receptor

Single gene

DOOR ID: 3467242

RA0C_1832

4

1896949-1897054 (-)

SAM

1895949-1896885 (-)

RA0C_1870

Homoserine o-acetyltransferase

Operon

DOOR ID: 1338030

RA0C_1868,
RA0C_1869,
RA0C_1870

5

2125010-2125112 (+)

SAM

2125179-2126193 (+)

RA0C_2078

Homocysteine s-methyltransferase

Operon

DOOR ID: 1338080

RA0C_2078,
RA0C_2079,
RA0C_2080

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";}}