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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
418050-418142
(+)
TPP
418179-419184 (+)
tbpA
PMCN06_0395
Operon
DOOR ID:
986777
PMCN06_0395
(tbpA)
,
PMCN06_0396
(thiP)
,
PMCN06_0397
(thiQ)
,
PMCN06_0398
(bioB)
View Structure
2
598802-598938
(-)
MOCO
596294-598781 (-)
torZ
PMCN06_0562
Operon
DOOR ID:
986812
PMCN06_0562
(torZ)
,
PMCN06_0563
(torY)
View Structure
3
713909-714058
(-)
MOCO
712370-712805 (-)
moaC
PMCN06_0654
Operon
DOOR ID:
986835
PMCN06_0652
(moaE)
,
PMCN06_0653
(moaD)
,
PMCN06_0654
(moaC)
,
PMCN06_0655
(moaA)
View Structure
4
1024682-1024856
(-)
lysine
1023067-1024465 (-)
PMCN06_0948
PMCN06_0948
Single gene
DOOR ID:
3458398
PMCN06_0948
View Structure
5
1212560-1212625
(+)
PreQ1
1212628-1213315 (+)
exsB
PMCN06_1114
Operon
DOOR ID:
986941
PMCN06_1110
(prfB)
,
PMCN06_1111
(lysU)
,
PMCN06_1112,
PMCN06_1113
(neuA)
,
PMCN06_1114
(exsB)
,
PMCN06_1115
(queD)
,
PMCN06_1116
View Structure
6
1306233-1306354
(-)
glycine
1304743-1306117 (-)
alsT
PMCN06_1214
Single gene
DOOR ID:
3458444
PMCN06_1214
(alsT)
View Structure
7
1753983-1754138
(-)
FMN
1753221-1753866 (-)
ribB
PMCN06_1642
Single gene
DOOR ID:
3458502
PMCN06_1642
(ribB)
View Structure
8
2047542-2047645
(-)
TPP
2046732-2047461 (-)
thiZ
PMCN06_1931
Operon
DOOR ID:
987094
PMCN06_1928
(thiY)
,
PMCN06_1929
(tenA)
,
PMCN06_1930
(thiX)
,
PMCN06_1931
(thiZ)
View Structure
Genome:
Pasteurella multocida subsp. multocida str. HN06
(
NC_017027.1
);
Phylum:
Gammaproteobacteria
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