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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
867045-867253
(-)
ydaO-yuaA
866236-867031 (-)
OCQ_08790
OCQ_08790
Single gene
DOOR ID:
3452857
OCQ_08790
View Structure
2
1173078-1173346
(-)
cobalamin
1170656-1172927 (-)
OCQ_11670
OCQ_11670
Single gene
DOOR ID:
3452975
OCQ_11670
View Structure
3
1254863-1255045
(-)
cobalamin
1253051-1254728 (-)
OCQ_12390
OCQ_12390
Single gene
DOOR ID:
3453001
OCQ_12390
View Structure
4
2367273-2367364
(+)
SAH
2367372-2371167 (+)
OCQ_22340
OCQ_22340
Single gene
DOOR ID:
3453358
OCQ_22340
View Structure
5
2712884-2712981
(-)
glycine
2709878-2712704 (-)
OCQ_25720
OCQ_25720
Single gene
DOOR ID:
3453489
OCQ_25720
View Structure
6
2740722-2740896
(-)
ykoK
2740297-2740429 (-)
OCQ_26010
OCQ_26010
Operon
DOOR ID:
1232596
OCQ_26000,
OCQ_26010
View Structure
7
3346735-3346916
(-)
ykoK
3346201-3346447 (-)
OCQ_31470
OCQ_31470
Single gene
DOOR ID:
3453663
OCQ_31470
View Structure
8
4529391-4529453
(+)
ykkC-III
4529466-4529781 (+)
OCQ_43020
OCQ_43020
single gene
DOOR ID:
3454034
OCQ_43020
View Structure
9
4536537-4536653
(+)
SAM-IV
4536831-4538220 (+)
OCQ_43080
OCQ_43080
Operon
DOOR ID:
1232974
OCQ_43080,
OCQ_43090,
OCQ_43100,
OCQ_43110
View Structure
10
4964952-4965062
(+)
TPP
4965089-4966694 (+)
OCQ_47400
OCQ_47400
Single gene
DOOR ID:
3454172
OCQ_47400
View Structure
11
4988108-4988226
(-)
TPP
4986877-4987087 (-)
OCQ_47630
OCQ_47630
Operon
DOOR ID:
1233075
OCQ_47610,
OCQ_47620,
OCQ_47630,
OCQ_47640
View Structure
12
5363150-5363322
(-)
ykoK
5362684-5362843 (-)
OCQ_51270
OCQ_51270
Operon
DOOR ID:
1233149
OCQ_51260,
OCQ_51270
View Structure
Genome:
Mycobacterium intracellulare MOTT-64
(
NC_016948.1
);
Phylum:
Actinobacteria
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