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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
848013-848221
(-)
ydaO-yuaA
847204-847999 (-)
OCO_08630
OCO_08630
Single gene
DOOR ID:
3450985
OCO_08630
View Structure
2
1161481-1161749
(-)
cobalamin
1159059-1161330 (-)
OCO_11660
OCO_11660
Single gene
DOOR ID:
3451108
OCO_11660
View Structure
3
1243293-1243475
(-)
cobalamin
1241481-1243158 (-)
OCO_12370
OCO_12370
Single gene
DOOR ID:
3451135
OCO_12370
View Structure
4
2497134-2497225
(+)
SAH
2497233-2501028 (+)
OCO_23810
OCO_23810
Single gene
DOOR ID:
3451542
OCO_23810
View Structure
5
2839862-2839959
(-)
glycine
2836856-2839682 (-)
OCO_27160
OCO_27160
Single gene
DOOR ID:
3451670
OCO_27160
View Structure
6
2867704-2867878
(-)
ykoK
2867279-2867399 (-)
OCO_27450
OCO_27450
Operon
DOOR ID:
1231482
OCO_27440,
OCO_27450
View Structure
7
3274784-3274967
(-)
ykoK
3274251-3274497 (-)
OCO_30830
OCO_30830
Single gene
DOOR ID:
3451799
OCO_30830
View Structure
8
4410613-4410675
(+)
ykkC-III
4410688-4411003 (+)
OCO_41750
OCO_41750
single gene
DOOR ID:
3452149
OCO_41750
View Structure
9
4417759-4417875
(+)
SAM-IV
4418053-4419442 (+)
OCO_41810
OCO_41810
Operon
DOOR ID:
1231804
OCO_41810,
OCO_41820,
OCO_41830,
OCO_41840
View Structure
10
4869163-4869273
(+)
TPP
4869300-4870905 (+)
OCO_46350
OCO_46350
Operon
DOOR ID:
1231910
OCO_46350,
OCO_46360
View Structure
11
4892220-4892338
(-)
TPP
4890989-4891199 (-)
OCO_46590
OCO_46590
Operon
DOOR ID:
1231916
OCO_46570,
OCO_46580,
OCO_46590,
OCO_46600
View Structure
12
5270143-5270315
(-)
ykoK
5269677-5269836 (-)
OCO_50280
OCO_50280
Operon
DOOR ID:
1231990
OCO_50270,
OCO_50280
View Structure
Genome:
Mycobacterium intracellulare MOTT-02
(
NC_016947.1
);
Phylum:
Actinobacteria
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