About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
232104-232276
(-)
lysine
230444-232025 (-)
O3Y_14463
O3Y_14463
Single gene
DOOR ID:
3448531
O3Y_14463
View Structure
2
755079-755185
(+)
c-di-GMP-I
755302-756760 (+)
O3Y_17318
O3Y_17318
single gene
DOOR ID:
3448740
O3Y_17318
View Structure
3
1011271-1011409
(-)
FMN
1010499-1011156 (-)
ribB
O3Y_18453
Single gene
DOOR ID:
3448834
O3Y_18453
(ribB)
View Structure
Genome:
Vibrio cholerae IEC224 chromosome II
(
NC_016945.1
);
Phylum:
Gammaproteobacteria
a:4:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_016945.1";i:2;s:36:"Vibrio cholerae IEC224 chromosome II";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"232104-232276";i:6;s:1:"-";i:7;s:6:"lysine";i:8;s:0:"";i:9;s:13:"230444-232025";i:10;s:1:"-";i:11;s:9:"O3Y_14463";i:12;s:0:"";i:13;s:9:"O3Y_14463";i:14;s:11:"Single gene";i:15;s:7:"3448531";i:16;s:9:"O3Y_14463";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_016945.1";i:2;s:36:"Vibrio cholerae IEC224 chromosome II";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"755079-755185";i:6;s:1:"+";i:7;s:10:"c-di-GMP-I";i:8;s:0:"";i:9;s:13:"755302-756760";i:10;s:1:"+";i:11;s:9:"O3Y_17318";i:12;s:0:"";i:13;s:9:"O3Y_17318";i:14;s:11:"single gene";i:15;s:7:"3448740";i:16;s:9:"O3Y_17318";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_016945.1";i:2;s:36:"Vibrio cholerae IEC224 chromosome II";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1011271-1011409";i:6;s:1:"-";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1010499-1011156";i:10;s:1:"-";i:11;s:4:"ribB";i:12;s:0:"";i:13;s:9:"O3Y_18453";i:14;s:11:"Single gene";i:15;s:7:"3448834";i:16;s:15:"O3Y_18453(ribB)";i:17;s:0:"";i:18;s:15:"View Structure ";}}